RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 E9PBE3 544 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 SLCO1B7G3V0H7 640 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 MSTNO14793 375 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 HDAC3O15379 428 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 TNFSF13O75888 250 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 SYNGR4O95473 234 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 AGR2O95994 175 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 PLGP00747 810 aaPredicted RBP15.82■□□□□ 0.12
NUP50-208ENST00000430547 EPXP11678 715 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 UQCRC2P22695 453 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 S100A3P33764 101 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 EIF1P41567 113 aaKnown RBP15.82■□□□□ 0.12
NUP50-208ENST00000430547 P2RX1P51575 399 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 RAC1P63000 192 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 FAM174BQ3ZCQ3 159 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 KLHL26Q53HC5 615 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 SPANXN4Q5MJ08 99 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 BEND6Q5SZJ8 279 aaPredicted RBP15.82■□□□□ 0.12
NUP50-208ENST00000430547 PDSS1Q5T2R2 415 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 ATAD3BQ5T9A4 648 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 SPATA19Q7Z5L4 167 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 GGNQ86UU5 652 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 CLEC4FQ8N1N0 589 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 LINC01560Q8TB33 94 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 RNF122Q9H9V4 155 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 TMBIM4Q9HC24 238 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 RASSF1Q9NS23 344 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 MCTS1Q9ULC4 181 aaKnown RBP15.82■□□□□ 0.12
NUP50-208ENST00000430547 EDARQ9UNE0 448 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 CARD8Q9Y2G2 431 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 DTNAQ9Y4J8 743 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 SPG11Q96JI7 2443 aa15.82■□□□□ 0.12
NUP50-208ENST00000430547 GOLGA8QA0A0J9YX86 632 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 GOLGA8OA6NCC3 632 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 A8MXE2 369 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 GOLGA8NF8WBI6 632 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 SDHDO14521 159 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 SNNO75324 88 aaPredicted RBP15.81■□□□□ 0.12
NUP50-208ENST00000430547 STX11O75558 287 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 CHI3L1P36222 383 aaPredicted RBP15.81■□□□□ 0.12
NUP50-208ENST00000430547 RNF144AP50876 292 aaPredicted RBP15.81■□□□□ 0.12
NUP50-208ENST00000430547 CCR4P51679 360 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 SUMO3P55854 103 aaPredicted RBP15.81■□□□□ 0.12
NUP50-208ENST00000430547 NME5P56597 212 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 GPR68Q15743 365 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 NXNQ6DKJ4 435 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 VWA1Q6PCB0 445 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 HEATR5AQ86XA9 2040 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 OR10D3Q8NH80 312 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 RFWD2Q8NHY2 731 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 SDF2Q99470 211 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 ZBTB18Q99592 522 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 OR51I1Q9H343 314 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 TMEM185BQ9H7F4 350 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 MANSC1Q9H8J5 431 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 AIG1Q9NVV5 245 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 NDRG3Q9UGV2 375 aa15.81■□□□□ 0.12
NUP50-208ENST00000430547 ANKRD28O15084 1053 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 OPN1LWP04000 364 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 LINGO3P0C6S8 592 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 UBL4AP11441 157 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 EPHA3P29320 983 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 KCNJ5P48544 419 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 KHKP50053 298 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 CASP9P55211 416 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 HPCAP84074 193 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 FOXF1Q12946 379 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 CASP8Q14790 479 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 DAZAP2Q15038 168 aaPredicted RBP15.8■□□□□ 0.12
NUP50-208ENST00000430547 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.8■□□□□ 0.12
NUP50-208ENST00000430547 PDZK1Q5T2W1 519 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 ESPNLQ6ZVH7 1005 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 TRIML2Q8N7C3 387 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 CHDHQ8NE62 594 aaPredicted RBP15.8■□□□□ 0.12
NUP50-208ENST00000430547 TOR1AIP2Q8NFQ8 470 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 OR2V1Q8NHB1 315 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 TLCD1Q96CP7 247 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 STARD4Q96DR4 205 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 NPAS1Q99742 590 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 SLC35A5Q9BS91 424 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 NMUR2Q9GZQ4 415 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 SERHL2Q9H4I8 314 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 WDR55Q9H6Y2 383 aaPredicted RBP15.8■□□□□ 0.12
NUP50-208ENST00000430547 EMC9Q9Y3B6 208 aa15.8■□□□□ 0.12
NUP50-208ENST00000430547 GPC6Q9Y625 555 aaPredicted RBP15.8■□□□□ 0.12
NUP50-208ENST00000430547 SH3D21A4FU49 640 aa15.79■□□□□ 0.12
NUP50-208ENST00000430547 GJE1A6NN92 205 aa15.79■□□□□ 0.12
NUP50-208ENST00000430547 TNFSF11O14788 317 aa15.79■□□□□ 0.12
NUP50-208ENST00000430547 CASKO14936 926 aa15.79■□□□□ 0.12
NUP50-208ENST00000430547 ZNF264O43296 627 aa15.79■□□□□ 0.12
NUP50-208ENST00000430547 CXCL13O43927 109 aa15.79■□□□□ 0.12
NUP50-208ENST00000430547 EIF4E2O60573 245 aaKnown RBP15.79■□□□□ 0.12
NUP50-208ENST00000430547 SCN2BO60939 215 aa15.79■□□□□ 0.12
NUP50-208ENST00000430547 GOSR1O95249 250 aa15.79■□□□□ 0.12
NUP50-208ENST00000430547 ALDOCP09972 364 aaKnown RBP15.79■□□□□ 0.12
NUP50-208ENST00000430547 ELK4P28324 431 aa15.79■□□□□ 0.12
NUP50-208ENST00000430547 DNAJA1P31689 397 aaKnown RBP15.79■□□□□ 0.12
NUP50-208ENST00000430547 SFTPDP35247 375 aa15.79■□□□□ 0.12
NUP50-208ENST00000430547 KIR2DL2P43627 348 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms