RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 FPR3P25089 353 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 GPR4P46093 362 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 SMSP52788 366 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 NUDT6P53370 316 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 TUBA3CQ13748 450 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 GINS1Q14691 196 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 RASSF6Q6ZTQ3 369 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 PRSS48Q7RTY5 328 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 RNF113BQ8IZP6 322 aaKnown RBP13.18□□□□□ -0.3
CALD1-207ENST00000430085 IQCF1Q8N6M8 205 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 ZSCAN1Q8NBB4 408 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 OR13F1Q8NGS4 319 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 GRHL3Q8TE85 626 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 RHBDD1Q8TEB9 315 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 TMEM239Q8WW34 195 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 TRUB1Q8WWH5 349 aaKnown RBP13.18□□□□□ -0.3
CALD1-207ENST00000430085 METTL21AQ8WXB1 218 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 ADIPOR1Q96A54 375 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 Q96MT0 163 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 IL4I1Q96RQ9 567 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 LMF1Q96S06 567 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 CTRCQ99895 268 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 PRSS27Q9BQR3 290 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 TRIM2Q9C040 744 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 EGLN3Q9H6Z9 239 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 AMBNQ9NP70 447 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 UBQLN4Q9NRR5 601 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 PSORS1C1Q9UIG5 152 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 SLC35A3Q9Y2D2 325 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 PCDHGB1Q9Y5G3 927 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 COMMD3-BMI1R4GMX3 469 aa13.18□□□□□ -0.3
CALD1-207ENST00000430085 FER1L5A0AVI2 2057 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 LNP1A1A4G5 178 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 OR6C76A6NM76 312 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 CLCA1A8K7I4 914 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 IDSB3KWA1 339 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 PIP5K1CO60331 668 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 FGF5P12034 268 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 ITIH1P19827 911 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 COL5A1P20908 1838 aaPredicted RBP13.17□□□□□ -0.3
CALD1-207ENST00000430085 PCMT1P22061 227 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 STAT5AP42229 794 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 GIPRP48546 466 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 SNRPGP62308 76 aaKnown RBP13.17□□□□□ -0.3
CALD1-207ENST00000430085 EMX1Q04741 257 aaPredicted RBP13.17□□□□□ -0.3
CALD1-207ENST00000430085 EBPQ15125 230 aaKnown RBP13.17□□□□□ -0.3
CALD1-207ENST00000430085 CSRP2Q16527 193 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 B3GNT6Q6ZMB0 384 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 OVCH1Q7RTY7 1134 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 KIF18BQ86Y91 864 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 C9orf40Q8IXQ3 194 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 OIT3Q8WWZ8 545 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 LHPPQ9H008 270 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 RXFP3Q9NSD7 469 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 TVP23BQ9NYZ1 205 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 RPS6KB2Q9UBS0 482 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 SCDO00767 359 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 FLRT2O43155 660 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 NOL3O60936 208 aaKnown RBP13.17□□□□□ -0.3
CALD1-207ENST00000430085 LRP3O75074 770 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 CPNE3O75131 537 aaKnown RBP13.17□□□□□ -0.3
CALD1-207ENST00000430085 SEC14L2O76054 403 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 FADS2O95864 444 aaKnown RBP13.17□□□□□ -0.3
CALD1-207ENST00000430085 MT-ND2P03891 347 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 PTNP21246 168 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 ACP1P24666 158 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 IL12BP29460 328 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 ACAA2P42765 397 aaKnown RBP13.17□□□□□ -0.3
CALD1-207ENST00000430085 FOXL2P58012 376 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 MVKQ03426 396 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 ZFP36L1Q07352 338 aaKnown RBP13.17□□□□□ -0.3
CALD1-207ENST00000430085 KLHL26Q53HC5 615 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 GPR107Q5VW38 600 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 SLC27A4Q6P1M0 643 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 CCDC81Q6ZN84 652 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 CDK20Q8IZL9 346 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 OR8J1Q8NGP2 316 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 RORBQ92753 470 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 OSTF1Q92882 214 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 MUL1Q969V5 352 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 ARSGQ96EG1 525 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 TEX12Q9BXU0 123 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 WWTR1Q9GZV5 400 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 DSN1Q9H410 356 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 SELENONQ9NZV5 590 aa13.17□□□□□ -0.3
CALD1-207ENST00000430085 A0A0B4J2E0 115 aa13.16□□□□□ -0.3
CALD1-207ENST00000430085 A0A1B0GWA3 101 aa13.16□□□□□ -0.3
CALD1-207ENST00000430085 A0A1B0GX12 115 aa13.16□□□□□ -0.3
CALD1-207ENST00000430085 ZNF99A8MXY4 864 aaPredicted RBP13.16□□□□□ -0.3
CALD1-207ENST00000430085 ZNF701M0R085 212 aaPredicted RBP13.16□□□□□ -0.3
CALD1-207ENST00000430085 CHP2O43745 196 aa13.16□□□□□ -0.3
CALD1-207ENST00000430085 ALOX12BO75342 701 aa13.16□□□□□ -0.3
CALD1-207ENST00000430085 UTS2O95399 124 aa13.16□□□□□ -0.3
CALD1-207ENST00000430085 PAX7P23759 505 aa13.16□□□□□ -0.3
CALD1-207ENST00000430085 NR0B1P51843 470 aaKnown RBP13.16□□□□□ -0.3
CALD1-207ENST00000430085 CDK5Q00535 292 aa13.16□□□□□ -0.3
CALD1-207ENST00000430085 ZNF385CQ66K41 422 aaPredicted RBP13.16□□□□□ -0.3
CALD1-207ENST00000430085 WDR88Q6ZMY6 472 aa13.16□□□□□ -0.3
CALD1-207ENST00000430085 ANKRD37Q7Z713 158 aa13.16□□□□□ -0.3
CALD1-207ENST00000430085 ZNF440Q8IYI8 595 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms