RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 METTL27Q8N6F8 245 aaPredicted RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 LINC01555Q8NAE3 123 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 OR56A1Q8NGH5 318 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 CREB3L4Q8TEY5 395 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 SLC7A6Q92536 515 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 MED30Q96HR3 178 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 SLC6A18Q96N87 628 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 POLDIP3Q9BY77 421 aaKnown RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 A4GALTQ9NPC4 353 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 SIRT3Q9NTG7 399 aaPredicted RBP7.53□□□□□ -1.2
HPS4-205ENST00000429411 NUDT15Q9NV35 164 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 NDUFB11Q9NX14 153 aa7.53□□□□□ -1.2
HPS4-205ENST00000429411 DOCK9Q9BZ29 2069 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 A0A0G2JMP0 313 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 A0A0X1KG70 313 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 LRIT2A6NDA9 550 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 RIIAD1A6NNX1 92 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 B4DXG7 233 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 SMAD9O15198 467 aaKnown RBP7.52□□□□□ -1.21
HPS4-205ENST00000429411 PRKNO60260 465 aaPredicted RBP7.52□□□□□ -1.21
HPS4-205ENST00000429411 HCN1O60741 890 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 SEMA3DO95025 777 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 DHFRP00374 187 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 LALBAP00709 142 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 GLAP06280 429 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 CHRNB1P11230 501 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 ACVR2AP27037 513 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 RFX2P48378 723 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 ARHGDIBP52566 201 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 SNRPGP62308 76 aaKnown RBP7.52□□□□□ -1.21
HPS4-205ENST00000429411 PPP3R1P63098 170 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 IFITM2Q01629 132 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 ADAM15Q13444 863 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 EFR3AQ14156 821 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 IRF4Q15306 451 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 PLK5Q496M5 336 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 RANBP3LQ86VV4 465 aaPredicted RBP7.52□□□□□ -1.21
HPS4-205ENST00000429411 SERPINA12Q8IW75 414 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 ACBD7Q8N6N7 88 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 FRMD1Q8N878 549 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 OR4M2Q8NGB6 313 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 OR8D4Q8NGM9 314 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 OSTF1Q92882 214 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 ORAI1Q96D31 301 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 FCRL1Q96LA6 429 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 ALG8Q9BVK2 526 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 B3GNT4Q9C0J1 378 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 SERGEFQ9UGK8 458 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 DIMT1Q9UNQ2 313 aaKnown RBP7.52□□□□□ -1.21
HPS4-205ENST00000429411 RASD1Q9Y272 281 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 SLC27A6Q9Y2P4 619 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 EXOSC1Q9Y3B2 195 aaKnown RBP7.52□□□□□ -1.21
HPS4-205ENST00000429411 OR10H1Q9Y4A9 318 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 PCDHGB2Q9Y5G2 931 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 SPACA6W5XKT8 324 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 HEATR5BQ9P2D3 2071 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 A0A075B6Q4 140 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 SERTM1A2A2V5 107 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 PRAMEF27A3QJZ7 478 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 HMX3A6NHT5 357 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 SOD1P00441 154 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 IL1AP01583 271 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 IFNA16P05015 189 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 HPGDP15428 266 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 TRHRP34981 398 aaPredicted RBP7.52□□□□□ -1.21
HPS4-205ENST00000429411 OPRD1P41143 372 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 RPL6Q02878 288 aaKnown RBP7.52□□□□□ -1.21
HPS4-205ENST00000429411 EEF1A2Q05639 463 aaKnown RBP7.52□□□□□ -1.21
HPS4-205ENST00000429411 DUSP2Q05923 314 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 CST6Q15828 149 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 TP53I3Q53FA7 332 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 FAM78AQ5JUQ0 283 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 LILRA6Q6PI73 481 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 GDPGP1Q6ZNW5 385 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 GDPD1Q8N9F7 314 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 TOR1AIP2Q8NFQ8 470 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 OR13C5Q8NGS8 318 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 OR4K13Q8NH42 304 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 OR8K3Q8NH51 312 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 DEDD2Q8WXF8 326 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 RERGQ96A58 199 aaPredicted RBP7.52□□□□□ -1.21
HPS4-205ENST00000429411 ZMYND19Q96E35 227 aaPredicted RBP7.52□□□□□ -1.21
HPS4-205ENST00000429411 SDHCQ99643 169 aaPredicted RBP7.52□□□□□ -1.21
HPS4-205ENST00000429411 KCNN2Q9H2S1 579 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 HINT3Q9NQE9 182 aaKnown RBP7.52□□□□□ -1.21
HPS4-205ENST00000429411 GPR34Q9UPC5 381 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 A3GALT2U3KPV4 340 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 GBF1Q92538 1859 aa7.52□□□□□ -1.21
HPS4-205ENST00000429411 LOC105371267A0A1B0GV96 52 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 HOXC11O43248 304 aaPredicted RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 PPP1R3DO95685 299 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 CLUP10909 449 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 ATP5A1P25705 553 aaKnown RBP7.51□□□□□ -1.21
HPS4-205ENST00000429411 DDX6P26196 483 aaKnown RBP eCLIP7.51□□□□□ -1.21
HPS4-205ENST00000429411 ACADLP28330 430 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 GABRA3P34903 492 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 PCP4P48539 62 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 DIO1P49895 249 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 EPHA5P54756 1037 aa7.51□□□□□ -1.21
HPS4-205ENST00000429411 OR10A3P58181 314 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms