RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 OR14C36Q8NHC7 312 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 RSPRY1Q96DX4 576 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 SEMA4CQ9C0C4 833 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 TMEM74BQ9NUR3 256 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 BABAM2Q9NXR7 383 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 MRPL39Q9NYK5 338 aaKnown RBP11.62□□□□□ -0.55
CDH3-202ENST00000429102 ICKQ9UPZ9 632 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 TRDV1A0A1B0GX56 115 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 TMEM129A0AVI4 362 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 GRXCR1A8MXD5 290 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 MAN2B1O00754 1011 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 HCN1O60741 890 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 FZD7O75084 574 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 MOSPD3O75425 235 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 ZIC2O95409 532 aaPredicted RBP11.62□□□□□ -0.55
CDH3-202ENST00000429102 PAPLNO95428 1278 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 C1QBP02746 253 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 MAKP20794 623 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 RPS27P42677 84 aaKnown RBP11.62□□□□□ -0.55
CDH3-202ENST00000429102 UBE2MP61081 183 aaKnown RBP11.62□□□□□ -0.55
CDH3-202ENST00000429102 CRMP1Q14194 572 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 ACSM3Q53FZ2 586 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 HOMEZQ8IX15 550 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 OR7G2Q8NG99 324 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 OR5J2Q8NH18 312 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 GHSRQ92847 366 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 RIT1Q92963 219 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 GTF2A1LQ9UNN4 478 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 INSL6Q9Y581 213 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 CACNG2Q9Y698 323 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 CDH10Q9Y6N8 788 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 PVRP15151 417 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 STOMP27105 288 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 OMPP47874 163 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 PITPNBP48739 271 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 GAS1P54826 345 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 CLDN20P56880 219 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 MLF2Q15773 248 aaPredicted RBP11.62□□□□□ -0.55
CDH3-202ENST00000429102 SLC25A25Q6KCM7 469 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 SFXN4Q6P4A7 337 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 HDDC3Q8N4P3 179 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 C10orf53Q8N6V4 93 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 GATSQ8NAP1 163 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 OR52E1Q8NGJ3 308 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 ZNF296Q8WUU4 475 aaPredicted RBP11.62□□□□□ -0.55
CDH3-202ENST00000429102 OSTF1Q92882 214 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 CD180Q99467 661 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 GON7Q9BXV9 100 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 FKRPQ9H9S5 495 aa11.62□□□□□ -0.55
CDH3-202ENST00000429102 A0A087WV48 116 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 ACOD1A6NK06 481 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 ZNF888P0CJ79 500 aaPredicted RBP11.61□□□□□ -0.55
CDH3-202ENST00000429102 ATP5A1P25705 553 aaKnown RBP11.61□□□□□ -0.55
CDH3-202ENST00000429102 PTGS2P35354 604 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 RPL4P36578 427 aaKnown RBP11.61□□□□□ -0.55
CDH3-202ENST00000429102 TEKQ02763 1124 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 PRDX1Q06830 199 aaKnown RBP11.61□□□□□ -0.55
CDH3-202ENST00000429102 ELOAQ14241 798 aaKnown RBP11.61□□□□□ -0.55
CDH3-202ENST00000429102 PUS10Q3MIT2 529 aaKnown RBP11.61□□□□□ -0.55
CDH3-202ENST00000429102 SSX6Q7RTT6 188 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 OR2A1Q8NGT9 310 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 ELP4Q96EB1 424 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 CAMK1GQ96NX5 476 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 FOXN4Q96NZ1 517 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 DERL3Q96Q80 235 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 WDR26Q9H7D7 661 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 PRKAG2Q9UGJ0 569 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 APOBEC3BQ9UH17 382 aaKnown RBP11.61□□□□□ -0.55
CDH3-202ENST00000429102 GNG8Q9UK08 70 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 CDHR4A6H8M9 788 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 A8MVJ9 347 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 CHP2O43745 196 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 EFCAB14O75071 495 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 RGS9O75916 674 aaPredicted RBP11.61□□□□□ -0.55
CDH3-202ENST00000429102 RGS11O94810 467 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 CPMP14384 443 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 ENDOUP21128 410 aaKnown RBP11.61□□□□□ -0.55
CDH3-202ENST00000429102 DNASE1P24855 282 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 NDUFAF6Q330K2 333 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 TOR2AQ5JU69 321 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 RAB42Q8N4Z0 105 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 OR51J1Q9H342 316 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 DPEP2Q9H4A9 486 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 METTL17Q9H7H0 456 aaPredicted RBP11.61□□□□□ -0.55
CDH3-202ENST00000429102 A0A1W2PPV9 198 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 SIGLEC5O15389 551 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 ADRB1P08588 477 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 UCHL1P09936 223 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 MAPK9P45984 424 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 SIGLEC14Q08ET2 396 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 SNTB2Q13425 540 aaKnown RBP11.61□□□□□ -0.55
CDH3-202ENST00000429102 DUSP5Q16690 384 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 NDUFA9Q16795 377 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 EOGTQ5NDL2 527 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 CNKSR3Q6P9H4 555 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 WDR88Q6ZMY6 472 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 BOLLQ8N9W6 283 aaKnown RBP11.61□□□□□ -0.55
CDH3-202ENST00000429102 OR5T3Q8NGG3 340 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 OR52E2Q8NGJ4 325 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 CCL4L1Q8NHW4 92 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms