RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 RNF165Q6ZSG1 346 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 LINGO2Q7L985 606 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 ABI3BPQ7Z7G0 1075 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 TGIF2LXQ8IUE1 241 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 NXPE1Q8N323 547 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 KRTCAP2Q8N6L1 136 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 DCAF4L2Q8NA75 395 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 WFIKKN2Q8TEU8 576 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 FBXO17Q96EF6 278 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 MIEF1Q9NQG6 463 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 TVP23BQ9NYZ1 205 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 C1QTNF3-AMACRE9PGA6 284 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 GTPBP1O00178 669 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 ITGA10O75578 1167 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 SERPIND1P05546 499 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 FEN1P39748 380 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 SSX1Q16384 188 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 MANEAQ5SRI9 462 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 GTPBP8Q8N3Z3 284 aaPredicted RBP13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 SPPL3Q8TCT6 385 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 MED8Q96G25 268 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 LRFN5Q96NI6 719 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 EPYCQ99645 322 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 PITX2Q99697 317 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 REG4Q9BYZ8 158 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 F5H0A9 414 aaPredicted RBP13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 ANXA2P07355 339 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 C6P13671 934 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 SRP9P49458 86 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 CTSCP53634 463 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 RBBP4Q09028 425 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 CD300LGQ6UXG3 332 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 ZFP41Q8N8Y5 198 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 LRR1Q96L50 414 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 HHATLQ9HCP6 504 aa13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 CFAP20Q9Y6A4 193 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-203ENST00000428982 CSO75390 466 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 NCR1O76036 304 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 RAB36O95755 333 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 ANXA4P09525 319 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 GDF5P43026 501 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 BDKRB1P46663 353 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 LIMK1P53667 647 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 PTSQ03393 145 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 C3orf38Q5JPI3 329 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 LIPJQ5W064 366 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 PRO1933Q9H354 126 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 SEMA3GQ9NS98 782 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 HIDE1A8MVS5 230 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 RTCAO00442 366 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 OR7A17O14581 309 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 FADS1O60427 444 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 APODP05090 189 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 PSMA3P25788 255 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 ACRV1P26436 265 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 HOXD9P28356 352 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 CNR2P34972 360 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 OMPP47874 163 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 STK19P49842 368 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 HACD4Q5VWC8 232 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 ADAM5Q6NVV9 412 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 NOXRED1Q6NXP6 359 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 CBARPQ8N350 705 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 PROKR2Q8NFJ6 384 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 OR8D1Q8WZ84 308 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 PPCDCQ96CD2 204 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 MSLNLQ96KJ4 702 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 HSPA12BQ96MM6 686 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 ZNF350Q9GZX5 532 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 SGK2Q9HBY8 427 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 MRPL15Q9P015 296 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 FZD4Q9ULV1 537 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 NEU3Q9UQ49 428 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 AGAP14A8MT82 685 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 ARPC1BO15143 372 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 FZD7O75084 574 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 LGI1O95970 557 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 ANXA7P20073 488 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 FAM219BQ5XKK7 198 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 PUSL1Q8N0Z8 303 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 RAB42Q8N4Z0 105 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 APH1BQ8WW43 257 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 CDCA3Q99618 268 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 KATNB1Q9BVA0 655 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 GULP1Q9UBP9 304 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 PCDHB11Q9Y5F2 797 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 NUP205Q92621 2012 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 MGAMO43451 1857 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 PDYNP01213 254 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 LY6G5CQ5SRR4 150 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 GEMIN6Q8WXD5 167 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 KLF16Q9BXK1 252 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 CLEC2DQ9UHP7 191 aa13.53□□□□□ -0.24
SYNGAP1-203ENST00000428982 ANK1P16157 1881 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 ASPDHA6ND91 283 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 PCDH8O95206 1070 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 GIPP09681 153 aaPredicted RBP13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 ADH5P11766 374 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 CELP19835 753 aa13.52□□□□□ -0.24
SYNGAP1-203ENST00000428982 ITPKAP23677 461 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms