RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 ZNF490Q9ULM2 529 aaPredicted RBP10.64□□□□□ -0.71
CECR3-201ENST00000428828 CFAP54Q96N23 3096 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 SPTBP11277 2137 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 IGHV5-51A0A0C4DH38 117 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 IL6P05231 212 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 EBLN1P0CF75 366 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 SLC2A2P11168 524 aaPredicted RBP10.64□□□□□ -0.71
CECR3-201ENST00000428828 STOMP27105 288 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 MAPK1P28482 360 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 CRYBB2P43320 205 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 MEOX2P50222 304 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 CLDN6P56747 220 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 ABHD18Q0P651 414 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 DDX39BQ13838 428 aaKnown RBP10.64□□□□□ -0.71
CECR3-201ENST00000428828 COL9A2Q14055 689 aaPredicted RBP10.64□□□□□ -0.71
CECR3-201ENST00000428828 TRIP6Q15654 476 aaKnown RBP10.64□□□□□ -0.71
CECR3-201ENST00000428828 DEFB110Q30KQ9 67 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 GTDC1Q4AE62 458 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 FLYWCH1Q4VC44 716 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 SGO1Q5FBB7 561 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 PABPC1L2AQ5JQF8 200 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 NHLRC3Q5JS37 347 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 ADNP2Q6IQ32 1131 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 RNF165Q6ZSG1 346 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 KRT74Q7RTS7 529 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 HSD17B13Q7Z5P4 300 aaPredicted RBP10.64□□□□□ -0.71
CECR3-201ENST00000428828 PIP4P1Q86T03 277 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 UXS1Q8NBZ7 420 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 RCBTB1Q8NDN9 531 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 METTL6Q8TCB7 284 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 UBE2FQ969M7 185 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 FCRL4Q96PJ5 515 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 HBEGFQ99075 208 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 NTMT1Q9BV86 223 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 CNPPD1Q9BV87 410 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 ZNF436Q9C0F3 470 aaPredicted RBP10.64□□□□□ -0.71
CECR3-201ENST00000428828 MED28Q9H204 178 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 PELI2Q9HAT8 420 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 HHATLQ9HCP6 504 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 GALNT9Q9HCQ5 603 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 NDRG3Q9UGV2 375 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 RPS6KA6Q9UK32 745 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 TMCC3Q9ULS5 477 aa10.64□□□□□ -0.71
CECR3-201ENST00000428828 A0A1W2PQL4 384 aaPredicted RBP10.63□□□□□ -0.71
CECR3-201ENST00000428828 TLCD2A6NGC4 264 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 OR1F1O43749 312 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 MPC2O95563 127 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 FABP3P05413 133 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 GP1BAP07359 652 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 FGF2P09038 288 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 CSNK1G2P78368 415 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 FGFBP1Q14512 234 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 ZIC1Q15915 447 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 LRIF1Q5T3J3 769 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 PHF19Q5T6S3 580 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 FCRL6Q6DN72 434 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 GRHL2Q6ISB3 625 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 FIGLAQ6QHK4 219 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 WDR74Q6RFH5 385 aaPredicted RBP10.63□□□□□ -0.71
CECR3-201ENST00000428828 SCIMPQ6UWF3 145 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 MSRB3Q8IXL7 192 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 RNF175Q8N4F7 328 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 MS4A15Q8N5U1 240 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 C19orf47Q8N9M1 422 aaKnown RBP10.63□□□□□ -0.71
CECR3-201ENST00000428828 OR2T4Q8NH00 348 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 CLHC1Q8NHS4 586 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 TEX47Q8TBZ9 253 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 NETO1Q8TDF5 533 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 NXPE2Q96DL1 559 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 SCMH1Q96GD3 660 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 OR2M2Q96R28 347 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 AIF1LQ9BQI0 150 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 TWSG1Q9GZX9 223 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 SEMA6CQ9H3T2 930 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 REEP1Q9H902 201 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 NDUFB11Q9NX14 153 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 GPR83Q9NYM4 423 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 NLKQ9UBE8 527 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 EPHA6Q9UF33 1036 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 TRPS1Q9UHF7 1281 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 DTX4Q9Y2E6 619 aa10.63□□□□□ -0.71
CECR3-201ENST00000428828 SAMHD1Q9Y3Z3 626 aaKnown RBP10.63□□□□□ -0.71
CECR3-201ENST00000428828 SPAARA0A1B0GVQ0 90 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 D6RAR5 112 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 LINC01387J3KSC0 135 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 SH3BGRLO75368 114 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 DHFRP00374 187 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 SERPIND1P05546 499 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 GAAP10253 952 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 JUPP14923 745 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 CALCRP30988 508 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 SDC2P34741 201 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 MAN2A2P49641 1150 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 ARL4DP49703 201 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 HTR6P50406 440 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 RAB13P51153 203 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 ATP12AP54707 1039 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 KCNAB1Q14722 419 aa10.62□□□□□ -0.71
CECR3-201ENST00000428828 LGALSLQ3ZCW2 172 aaPredicted RBP10.62□□□□□ -0.71
CECR3-201ENST00000428828 LIPJQ5W064 366 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms