RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 NEURL1O76050 574 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 SNX4O95219 450 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 EPPINO95925 133 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 LGI1O95970 557 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 FABP3P05413 133 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 GKN3PP0CG01 181 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 RAP2AP10114 183 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 UMPSP11172 480 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 PRG2P13727 222 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 ITGA2P17301 1181 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 HOXB6P17509 224 aaKnown RBP7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 SLC7A1P30825 629 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 RYKP34925 604 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 DNASE1L1P49184 302 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 PLAURQ03405 335 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZNF117Q03924 483 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 SKP2Q13309 424 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 NRF1Q16656 503 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 COL28A1Q2UY09 1125 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 FNDC7Q5VTL7 733 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 AP1ARQ63HQ0 302 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 OR5M10Q6IEU7 315 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 PLEKHM3Q6ZWE6 761 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZNF550Q7Z398 422 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 PACS2Q86VP3 889 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 CYP4Z1Q86W10 505 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZNF227Q86WZ6 799 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 LACC1Q8IV20 430 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZDHHC21Q8IVQ6 265 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 CADM2Q8N3J6 435 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZADH2Q8N4Q0 377 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 MDS2Q8NDY4 140 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 TOR1AIP2Q8NFQ8 470 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 OR6T1Q8NGN1 323 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 B4GALNT2Q8NHY0 566 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 DUSP19Q8WTR2 217 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 CRELD1Q96HD1 420 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZNF597Q96LX8 424 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 SMAD5Q99717 465 aaKnown RBP7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 CHID1Q9BWS9 393 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 ANGPTL4Q9BY76 406 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 HES7Q9BYE0 225 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 YY1AP1Q9H869 796 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 SH2D2AQ9NP31 389 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 TESQ9UGI8 421 aaKnown RBP7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZMIZ1Q9ULJ6 1067 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 KLF13Q9Y2Y9 288 aaPredicted RBP7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 FAM32AQ9Y421 112 aaKnown RBP7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 CHST2Q9Y4C5 530 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 PCDHGA9Q9Y5G4 932 aaKnown RBP7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 CSAG2Q9Y5P2 127 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 ENPP4Q9Y6X5 453 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 CROCCQ5TZA2 2017 aa7.23□□□□□ -1.25
HMGA1P4-201ENST00000428643 ACACAQ13085 2346 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 TRAV17A0A0B4J275 112 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 ANKRD33BA6NCL7 494 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 CPSF4LA6NMK7 179 aaKnown RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 FAM47E-STBD1D6RA91 191 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 H0Y3Z8 333 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 GNB5O14775 395 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 NME2P1O60361 137 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 CDC40O60508 579 aaKnown RBP eCLIP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 EIF4E2O60573 245 aaKnown RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 TIPRLO75663 272 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 DIRAS1O95057 198 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 SEMG1P04279 462 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 SP1P08047 785 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 LINGO3P0C6S8 592 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 FAM87AP0C7U9 286 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 FCGR1AP12314 374 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 NME2P22392 152 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 TCEA1P23193 301 aaKnown RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 ELAVL4P26378 380 aaKnown RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 IFNA8P32881 189 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 ADH7P40394 386 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 PTGDSP41222 190 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 YAP1P46937 504 aaKnown RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 SLC6A8P48029 635 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 TNFSF10P50591 281 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZNF41P51814 821 aaPredicted RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 GAS1P54826 345 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 SUMO3P55854 103 aaPredicted RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 TAS2R41P59536 307 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 COPZ1P61923 177 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 VLDLRP98155 873 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 PLGLB1Q02325 96 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 C17orf67Q0P5P2 114 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 KCNAB2Q13303 367 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 RCN1Q15293 331 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 NPTX1Q15818 432 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZNF766Q5HY98 468 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 SLC25A25Q6KCM7 469 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 TMEM81Q6P7N7 255 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 CBLN3Q6UW01 205 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 IGFL2Q6UWQ7 119 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 RBM45Q8IUH3 476 aaKnown RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 GRAMD2AQ8IUY3 354 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 TMEM178AQ8NBL3 297 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 CATSPER1Q8NEC5 780 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 FAM71CQ8NEG0 241 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms