RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 PRR14LQ5THK1 2151 aa13.42□□□□□ -0.26
RTN4-210ENST00000427710 SPG11Q96JI7 2443 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 ANKHD1Q8IWZ3 2542 aaKnown RBP13.41□□□□□ -0.26
RTN4-210ENST00000427710 DUXAA6NLW8 204 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 GTPBP1O00178 669 aaKnown RBP13.41□□□□□ -0.26
RTN4-210ENST00000427710 POLR3GO15318 223 aaPredicted RBP13.41□□□□□ -0.26
RTN4-210ENST00000427710 TMIGD3P0DMS9 266 aaPredicted RBP13.41□□□□□ -0.26
RTN4-210ENST00000427710 CD1EP15812 388 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 IL11P20809 199 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 KHKP50053 298 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 POLR2JP52435 117 aaKnown RBP13.41□□□□□ -0.26
RTN4-210ENST00000427710 SF3B4Q15427 424 aaKnown RBP eCLIP13.41□□□□□ -0.267e-7■■□□□ 13.4
RTN4-210ENST00000427710 TOMM34Q15785 309 aaPredicted RBP13.41□□□□□ -0.26
RTN4-210ENST00000427710 MAPK14Q16539 360 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 TMEM44Q2T9K0 475 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 PLPPR5Q32ZL2 321 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 SLC25A35Q3KQZ1 300 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 TIGD2Q4W5G0 525 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 HEPHL1Q6MZM0 1159 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 P4HA3Q7Z4N8 544 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 ADGRE4PQ86SQ3 457 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 MIER2Q8N344 545 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 GLB1L3Q8NCI6 653 aaPredicted RBP13.41□□□□□ -0.26
RTN4-210ENST00000427710 MIPOL1Q8TD10 442 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 FIG4Q92562 907 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 ROPN1LQ96C74 230 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 MAGEB18Q96M61 343 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 RNF145Q96MT1 663 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 HOXD1Q9GZZ0 328 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 ENKD1Q9H0I2 346 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 SDR39U1Q9NRG7 319 aaPredicted RBP13.41□□□□□ -0.26
RTN4-210ENST00000427710 EXD2Q9NVH0 621 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 DTNAQ9Y4J8 743 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 CSMD1Q96PZ7 3565 aa13.41□□□□□ -0.26
RTN4-210ENST00000427710 LRBAP50851 2863 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 FAM47E-STBD1D6RA91 191 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 HMGN4O00479 90 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 RFXANKO14593 260 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 BCAS1O75363 584 aaPredicted RBP13.4□□□□□ -0.26
RTN4-210ENST00000427710 STX11O75558 287 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 UGT2B17O75795 530 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 CYP7B1O75881 506 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 NUDT14O95848 222 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 IL6P05231 212 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 CTSSP25774 331 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 CCR4P51679 360 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 ZNF41P51814 821 aaPredicted RBP13.4□□□□□ -0.26
RTN4-210ENST00000427710 FOXF1Q12946 379 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 SYPL1Q16563 259 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 GLYR1Q49A26 553 aaPredicted RBP13.4□□□□□ -0.26
RTN4-210ENST00000427710 GPAT3Q53EU6 434 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 ATAD3BQ5T9A4 648 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 TYW3Q6IPR3 259 aaKnown RBP13.4□□□□□ -0.26
RTN4-210ENST00000427710 PPP4R4Q6NUP7 873 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 CHMP1BQ7LBR1 199 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 MISPQ8IVT2 679 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 MEIOBQ8N635 442 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 TMCO5AQ8N6Q1 288 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 ANKFN1Q8N957 763 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 ZNF527Q8NB42 609 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 ACBD4Q8NC06 268 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 ZG16BQ96DA0 208 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 AURKBQ96GD4 344 aaPredicted RBP13.4□□□□□ -0.26
RTN4-210ENST00000427710 SPOCK3Q9BQ16 436 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 PINK1Q9BXM7 581 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 ZNF350Q9GZX5 532 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 QRSL1Q9H0R6 528 aaKnown RBP13.4□□□□□ -0.26
RTN4-210ENST00000427710 AKAP9Q99996 3911 aa13.4□□□□□ -0.26
RTN4-210ENST00000427710 A0A087WZY1 265 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 SERINC4A6NH21 518 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 H3BNH8 94 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 EIF1AYO14602 144 aaKnown RBP13.39□□□□□ -0.27
RTN4-210ENST00000427710 DVL2O14641 736 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 SOX30O94993 753 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 TGDSO95455 350 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 ANP32DO95626 131 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 AK1P00568 194 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 IGFBP2P18065 325 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 SHC1P29353 583 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 UQCRC1P31930 480 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 CHRNEQ04844 493 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 SF3A3Q12874 501 aaKnown RBP eCLIP13.39□□□□□ -0.27
RTN4-210ENST00000427710 BCL2A1Q16548 175 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 SLC2A7Q6PXP3 512 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 FRRS1Q6ZNA5 592 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 MTERF4Q7Z6M4 381 aaKnown RBP13.39□□□□□ -0.27
RTN4-210ENST00000427710 GGNQ86UU5 652 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 GTPBP8Q8N3Z3 284 aaPredicted RBP13.39□□□□□ -0.27
RTN4-210ENST00000427710 TRIML2Q8N7C3 387 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 ATP6V1C2Q8NEY4 427 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 FBXO27Q8NI29 283 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 ZFP90Q8TF47 636 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 WNT2BQ93097 391 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 CCDC28BQ9BUN5 200 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 NMUR2Q9GZQ4 415 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 ICAM5Q9UMF0 924 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 WDR45Q9Y484 360 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 AP4B1Q9Y6B7 739 aa13.39□□□□□ -0.27
RTN4-210ENST00000427710 FAM234BA2RU67 622 aa13.38□□□□□ -0.27
RTN4-210ENST00000427710 SLC22A20A6NK97 555 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms