RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 PAGE3Q5JUK9 113 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 RIPPLY2Q5TAB7 128 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 METTL21CQ5VZV1 264 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 NSUN5P2Q63ZY6 315 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 CBLN3Q6UW01 205 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 LACC1Q8IV20 430 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 TRNT1Q96Q11 434 aaKnown RBP16.3■□□□□ 0.2
HERC3-205ENST00000426683 TUBA1CQ9BQE3 449 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 SAP130Q9H0E3 1048 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 Q9UFV3 132 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 ICAM5Q9UMF0 924 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 ASH1LQ9NR48 2969 aaKnown RBP16.3■□□□□ 0.2
HERC3-205ENST00000426683 FREM3P0C091 2139 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 USP9YO00507 2555 aaPredicted RBP16.3■□□□□ 0.2
HERC3-205ENST00000426683 A0A1W2PP18 115 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 CD8B2A6NJW9 211 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 ZNF264O43296 627 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 TOXO94900 526 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 NUDT14O95848 222 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 CHRM4P08173 479 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 NR2F1P10589 423 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 ETFAP13804 333 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 ZNF17P17021 662 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 HOXB9P17482 250 aaPredicted RBP16.29■□□□□ 0.2
HERC3-205ENST00000426683 GRNP28799 593 aaKnown RBP16.29■□□□□ 0.2
HERC3-205ENST00000426683 SUMO3P55854 103 aaPredicted RBP16.29■□□□□ 0.2
HERC3-205ENST00000426683 DSTNP60981 165 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 MAPK14Q16539 360 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 PLPPR5Q32ZL2 321 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 LRRC74BQ6ZQY2 392 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 HMGN2P46Q86SG4 172 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 UBQLNLQ8IYU4 475 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 TMCO5AQ8N6Q1 288 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 ZBTB8AQ96BR9 441 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 ZG16BQ96DA0 208 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 NPAS1Q99742 590 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 SLAMF8Q9P0V8 285 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 NCOA6Q14686 2063 aaPredicted RBP16.29■□□□□ 0.2
HERC3-205ENST00000426683 ICE1Q9Y2F5 2266 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 HECTD1Q9ULT8 2610 aa16.29■□□□□ 0.2
HERC3-205ENST00000426683 PTPN13Q12923 2485 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 FAM90A27PA6NNH2 459 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 CLIC1O00299 241 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 SEC14L5O43304 696 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 EIF4E2O60573 245 aaKnown RBP16.28■□□□□ 0.2
HERC3-205ENST00000426683 CYP7B1O75881 506 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 FGFBP1Q14512 234 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 LRIF1Q5T3J3 769 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 AP1ARQ63HQ0 302 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 GTPBP8Q8N3Z3 284 aaPredicted RBP16.28■□□□□ 0.2
HERC3-205ENST00000426683 MEIOBQ8N635 442 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 TOR1AIP2Q8NFQ8 470 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 TNIP2Q8NFZ5 429 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 LILRB4Q8NHJ6 448 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 OIT3Q8WWZ8 545 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 SMPDL3BQ92485 455 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 RNF145Q96MT1 663 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 QRSL1Q9H0R6 528 aaKnown RBP16.28■□□□□ 0.2
HERC3-205ENST00000426683 SLC38A1Q9H2H9 487 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 RUBCNLQ9H714 662 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 CALHM2Q9HA72 323 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 SLC25A37Q9NYZ2 338 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 P2RX2Q9UBL9 471 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 L3MBTL1Q9Y468 752 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 AP4B1Q9Y6B7 739 aa16.28■□□□□ 0.2
HERC3-205ENST00000426683 C7orf72A4D263 438 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 CLCA1A8K7I4 914 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 HSPB2A8KAH6 182 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 CSTAP01040 98 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 IL2RAP01589 272 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 LINGO3P0C6S8 592 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 TIMP3P35625 211 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 CCR4P51679 360 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 SUCLG1P53597 346 aaKnown RBP16.27■□□□□ 0.2
HERC3-205ENST00000426683 RGNQ15493 299 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 MAPK11Q15759 364 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 HSPB2Q16082 182 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 SP5Q6BEB4 398 aaPredicted RBP16.27■□□□□ 0.2
HERC3-205ENST00000426683 EIF3MQ7L2H7 374 aaKnown RBP16.27■□□□□ 0.2
HERC3-205ENST00000426683 CHMP1BQ7LBR1 199 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 MSRB3Q8IXL7 192 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 NAXEQ8NCW5 288 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 OR5W2Q8NH69 310 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 POC1BQ8TC44 478 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 UCK2Q9BZX2 261 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 LAT2Q9GZY6 243 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 RAD21L1Q9H4I0 556 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.27■□□□□ 0.2
HERC3-205ENST00000426683 VAPAQ9P0L0 249 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 LEF1Q9UJU2 399 aaPredicted RBP16.27■□□□□ 0.2
HERC3-205ENST00000426683 NDUFAF1Q9Y375 327 aa16.27■□□□□ 0.2
HERC3-205ENST00000426683 MBD3L4A6NDZ8 208 aaPredicted RBP16.26■□□□□ 0.19
HERC3-205ENST00000426683 MBD3L3A6NE82 208 aaPredicted RBP16.26■□□□□ 0.19
HERC3-205ENST00000426683 MBD3L5A6NJ08 208 aaPredicted RBP16.26■□□□□ 0.19
HERC3-205ENST00000426683 H0YC42 278 aa16.26■□□□□ 0.19
HERC3-205ENST00000426683 BCHEP06276 602 aa16.26■□□□□ 0.19
HERC3-205ENST00000426683 TFPTP0C1Z6 253 aa16.26■□□□□ 0.19
HERC3-205ENST00000426683 UBTFL6P0CB48 400 aaPredicted RBP16.26■□□□□ 0.19
HERC3-205ENST00000426683 PSMA4P25789 261 aaKnown RBP16.26■□□□□ 0.19
HERC3-205ENST00000426683 CEACAM8P31997 349 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms