RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 TRIM2Q9C040 744 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 RASSF1Q9NS23 344 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 PAK1IP1Q9NWT1 392 aaPredicted RBP13.99□□□□□ -0.17
ACTB-204ENST00000425660 SLC39A1Q9NY26 324 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 IGHV3-20A0A0C4DH32 117 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 CHP2O43745 196 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 MPZL2O60487 215 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 TSPAN2O60636 221 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 ABCB7O75027 752 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 SOX14O95416 240 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 CSTAP01040 98 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 NGFRP08138 427 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 HTR1AP08908 422 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 RAB15P59190 212 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 RNF4P78317 190 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 INSM1Q01101 510 aaPredicted RBP13.98□□□□□ -0.17
ACTB-204ENST00000425660 BROXQ5VW32 411 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 C12orf73Q69YU5 71 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 BORAQ6PGQ7 559 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 FAM198BQ6UWH4 519 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 WDR88Q6ZMY6 472 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 CPEB2Q7Z5Q1 589 aaKnown RBP13.98□□□□□ -0.17
ACTB-204ENST00000425660 CCDC103Q8IW40 242 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 NRMQ8IXM6 262 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 POGLUT1Q8NBL1 392 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 BPIFB6Q8NFQ5 453 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 NUBPLQ8TB37 319 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 CDC6Q99741 560 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 MESP1Q9BRJ9 268 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 TMEM27Q9HBJ8 222 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 EXOSC3Q9NQT5 275 aaKnown RBP13.98□□□□□ -0.17
ACTB-204ENST00000425660 PLCXD1Q9NUJ7 323 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 ZNF226Q9NYT6 803 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 FLRT3Q9NZU0 649 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 AASSQ9UDR5 926 aa13.98□□□□□ -0.17
ACTB-204ENST00000425660 TMX2-CTNND1H3BSU7 103 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 XPNPEP2O43895 674 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 RFPL3O75679 317 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 OR6B1O95007 311 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 UTS2O95399 124 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 NTN1O95631 604 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 EEF1B2P24534 225 aaKnown RBP13.97□□□□□ -0.17
ACTB-204ENST00000425660 ABCD3P28288 659 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 KRT20P35900 424 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 NR0B1P51843 470 aaKnown RBP13.97□□□□□ -0.17
ACTB-204ENST00000425660 CDCP2Q5VXM1 449 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 TMEM236Q5W0B7 351 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 PAPD4Q6PIY7 484 aaKnown RBP13.97□□□□□ -0.17
ACTB-204ENST00000425660 RASSF6Q6ZTQ3 369 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 ZNF440Q8IYI8 595 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 SLC34A3Q8N130 599 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 OR8K3Q8NH51 312 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 MPP4Q96JB8 637 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 ADOQ96SZ5 270 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 LPAR4Q99677 370 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 NRSN2Q9GZP1 204 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 RBM38Q9H0Z9 239 aaKnown RBP13.97□□□□□ -0.17
ACTB-204ENST00000425660 KRCC1Q9NPI7 259 aaPredicted RBP13.97□□□□□ -0.17
ACTB-204ENST00000425660 C19orf25Q9UFG5 118 aaPredicted RBP13.97□□□□□ -0.17
ACTB-204ENST00000425660 TPRKBQ9Y3C4 175 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 LOC102723996A0A087X1L8 192 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 A0A1B0GWA3 101 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 H3BN98 237 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 SCDO00767 359 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 MRPS14O60783 128 aaKnown RBP13.97□□□□□ -0.17
ACTB-204ENST00000425660 KLF7O75840 302 aaPredicted RBP13.97□□□□□ -0.17
ACTB-204ENST00000425660 IGFBP1P08833 259 aaPredicted RBP13.97□□□□□ -0.17
ACTB-204ENST00000425660 HPGDP15428 266 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 POU1F1P28069 291 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 FMO3P31513 532 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 PNLIPRP2P54317 469 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 CDK5Q00535 292 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 CD226Q15762 336 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 SMN1Q16637 294 aaKnown RBP13.97□□□□□ -0.17
ACTB-204ENST00000425660 ISXQ2M1V0 245 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 APOOLQ6UXV4 268 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 LINC00114Q6XXX2 140 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 HSDL2Q6YN16 418 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 SPARTQ8N0X7 666 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 WDR36Q8NI36 951 aaKnown RBP13.97□□□□□ -0.17
ACTB-204ENST00000425660 TMEM239Q8WW34 195 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 TRUB1Q8WWH5 349 aaKnown RBP13.97□□□□□ -0.17
ACTB-204ENST00000425660 SGCDQ92629 289 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 VMP1Q96GC9 406 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 FAM46AQ96IP4 442 aaKnown RBP13.97□□□□□ -0.17
ACTB-204ENST00000425660 ZPBPQ9BS86 351 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 STRADBQ9C0K7 418 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 IMPAD1Q9NX62 359 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 SCN3BQ9NY72 215 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 CNIH4Q9P003 139 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 LOXL2Q9Y4K0 774 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 PCDHGB1Q9Y5G3 927 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 PCDHGA1Q9Y5H4 931 aa13.97□□□□□ -0.17
ACTB-204ENST00000425660 A0A1W2PQD3 144 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 CDC14CA4D256 554 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 ITIH1P19827 911 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 IL12BP29460 328 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 STAT5AP42229 794 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 RBM34P42696 430 aaKnown RBP13.96□□□□□ -0.17
ACTB-204ENST00000425660 GIPRP48546 466 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms