RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 LINC01387J3KSC0 135 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 SYT5O00445 386 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 RCBTB2O95199 551 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 IL18BPO95998 194 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 LBPP18428 481 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 TBXA2RP21731 343 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 CPA2P48052 419 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 MAGOHP61326 146 aaKnown RBP11.46□□□□□ -0.57
SGCE-203ENST00000425444 HBA1P69905 142 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 BEND6Q5SZJ8 279 aaPredicted RBP11.46□□□□□ -0.57
SGCE-203ENST00000425444 DCST2Q5T1A1 773 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 PPP4R4Q6NUP7 873 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 ZAR1Q86SH2 424 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 ADGRE4PQ86SQ3 457 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 CLECL1Q8IZS7 167 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 ZNF614Q8N883 585 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 ZNF527Q8NB42 609 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 FAM110BQ8TC76 370 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 TMEM158Q8WZ71 300 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 SLC35G5Q96KT7 338 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 SH3GL2Q99962 352 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 MEAF6Q9HAF1 191 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 GPATCH2Q9NW75 528 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 FBXO34Q9NWN3 711 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 STOML1Q9UBI4 398 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 MARCOQ9UEW3 520 aaPredicted RBP11.46□□□□□ -0.57
SGCE-203ENST00000425444 HAO1Q9UJM8 370 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 ZNF337Q9Y3M9 751 aa11.46□□□□□ -0.57
SGCE-203ENST00000425444 KIAA1549Q9HCM3 1950 aa11.46□□□□□ -0.58
SGCE-203ENST00000425444 A0A087WZY1 265 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 NPIPA5A0A0B4J1W7 369 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 A0A1W2PQD3 144 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 TRIM64A6NGJ6 449 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 TRIM64BA6NI03 449 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 NPIPA7E9PJI5 369 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 RNASET2O00584 256 aaKnown RBP11.45□□□□□ -0.58
SGCE-203ENST00000425444 HCRTR2O43614 444 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 SOX30O94993 753 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 NPIPA8P0DM63 369 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 KITP10721 976 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 RNF144AP50876 292 aaPredicted RBP11.45□□□□□ -0.58
SGCE-203ENST00000425444 CLNS1AP54105 237 aaKnown RBP11.45□□□□□ -0.58
SGCE-203ENST00000425444 NME5P56597 212 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 WDR4P57081 412 aaKnown RBP11.45□□□□□ -0.58
SGCE-203ENST00000425444 RPS3AP61247 264 aaKnown RBP11.45□□□□□ -0.58
SGCE-203ENST00000425444 RPS26P62854 115 aaKnown RBP11.45□□□□□ -0.58
SGCE-203ENST00000425444 FOXF2Q12947 444 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 FBXL19-AS1Q494R0 122 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 GLYR1Q49A26 553 aaPredicted RBP11.45□□□□□ -0.58
SGCE-203ENST00000425444 EXOSC6Q5RKV6 272 aaKnown RBP11.45□□□□□ -0.58
SGCE-203ENST00000425444 ANXA8L1Q5VT79 327 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 ATG16L1Q676U5 607 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 OR2A2Q6IF42 318 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 POMZP3Q6PJE2 187 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 LUZP2Q86TE4 346 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 ANKRD46Q86W74 232 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 CXorf67Q86X51 503 aaPredicted RBP11.45□□□□□ -0.58
SGCE-203ENST00000425444 LRRC34Q8IZ02 419 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 CLEC4FQ8N1N0 589 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 VPS37AQ8NEZ2 397 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 OR5D16Q8NGK9 328 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 PHOSPHO1Q8TCT1 267 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 OR7D2Q96RA2 312 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 UCN2Q96RP3 112 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 HOXD1Q9GZZ0 328 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 THAP1Q9NVV9 213 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 AP4B1Q9Y6B7 739 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 ABCA1O95477 2261 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 MEGF8Q7Z7M0 2845 aa11.45□□□□□ -0.58
SGCE-203ENST00000425444 UQCRHLA0A096LP55 91 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 GOLGA8QA0A0J9YX86 632 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 GOLGA8OA6NCC3 632 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 TRPC5OSA6NMA1 111 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 E9PBE3 544 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 GOLGA8NF8WBI6 632 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 H0YC42 278 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 H3BNH8 94 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 HAX1O00165 279 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 EIF1AYO14602 144 aaKnown RBP11.44□□□□□ -0.58
SGCE-203ENST00000425444 CPSF4O95639 269 aaKnown RBP11.44□□□□□ -0.58
SGCE-203ENST00000425444 NUDT14O95848 222 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 TGM6O95932 706 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 EPXP11678 715 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 ZNF17P17021 662 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 MATN1P21941 496 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 CPOXP36551 454 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 TPD52P55327 224 aaPredicted RBP11.44□□□□□ -0.58
SGCE-203ENST00000425444 CLDN20P56880 219 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 CD226Q15762 336 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 SGCBQ16585 318 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 DPY19L1Q2PZI1 675 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 C6orf120Q7Z4R8 191 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 KIF18BQ86Y91 864 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 CNEP1R1Q8N9A8 125 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 OR8J2Q8NGG1 315 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 B4GALNT2Q8NHY0 566 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 RAB3IL1Q8TBN0 382 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 ZBTB8AQ96BR9 441 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 RBM24Q9BX46 236 aaKnown RBP11.44□□□□□ -0.58
SGCE-203ENST00000425444 PINK1Q9BXM7 581 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms