RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CEACAM4O75871 244 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 ALPPP05187 535 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 H1F0P07305 194 aaKnown RBP14.4□□□□□ -0.1
SHOX2-202ENST00000425436 CHRM4P08173 479 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 TNFRSF1BP20333 461 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 EEF1B2P24534 225 aaKnown RBP14.4□□□□□ -0.1
SHOX2-202ENST00000425436 GALNSP34059 522 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 SOX8P57073 446 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 RPP38P78345 283 aaKnown RBP14.4□□□□□ -0.1
SHOX2-202ENST00000425436 IL5RAQ01344 420 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 CD47Q08722 323 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 CDK5R2Q13319 367 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 EXOSC7Q15024 291 aaKnown RBP14.4□□□□□ -0.1
SHOX2-202ENST00000425436 TCTN3Q6NUS6 607 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 ISLR2Q6UXK2 745 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 SLC5A8Q8N695 610 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 CDRT4Q8N9R6 151 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 CHDHQ8NE62 594 aaPredicted RBP14.4□□□□□ -0.1
SHOX2-202ENST00000425436 OR7G2Q8NG99 324 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 VMP1Q96GC9 406 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 ABHD17AQ96GS6 310 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 HRASLS5Q96KN8 279 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 STACQ99469 402 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 TSC22D3Q99576 134 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 PIGUQ9H490 435 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 ZNF552Q9H707 407 aaPredicted RBP14.4□□□□□ -0.1
SHOX2-202ENST00000425436 EVA1AQ9H8M9 152 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 ZBTB20Q9HC78 741 aaPredicted RBP14.4□□□□□ -0.1
SHOX2-202ENST00000425436 SCN3BQ9NY72 215 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 LHX6Q9UPM6 363 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 TPRKBQ9Y3C4 175 aa14.4□□□□□ -0.1
SHOX2-202ENST00000425436 MAN1A2O60476 641 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 COQ9O75208 318 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 NME6O75414 186 aaPredicted RBP14.39□□□□□ -0.11
SHOX2-202ENST00000425436 CLPSP04118 112 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 IGKV3-11P04433 115 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 S1PR1P21453 382 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 PRKAR1BP31321 381 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 YAP1P46937 504 aaKnown RBP14.39□□□□□ -0.11
SHOX2-202ENST00000425436 CLK3P49761 638 aaKnown RBP14.39□□□□□ -0.11
SHOX2-202ENST00000425436 TEKQ02763 1124 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 MAP4K2Q12851 820 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 LAPTM4AQ15012 233 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 ARHGAP11BQ3KRB8 267 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 ZBED5Q49AG3 693 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 DCST1Q5T197 706 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 ANKRD34AQ69YU3 496 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 DHRS4L2Q6PKH6 230 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 C16orf47Q6ZP98 133 aaPredicted RBP14.39□□□□□ -0.11
SHOX2-202ENST00000425436 LINC00696Q6ZRV3 163 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 GPR141Q7Z602 305 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 DEPDC4Q8N2C3 294 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 VWA5B2Q8N398 1253 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 EXD3Q8N9H8 876 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 OR52J3Q8NH60 311 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 YIPF4Q9BSR8 244 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 DEFB126Q9BYW3 111 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 SEMA4CQ9C0C4 833 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 NMNAT1Q9HAN9 279 aaPredicted RBP14.39□□□□□ -0.11
SHOX2-202ENST00000425436 POLE3Q9NRF9 147 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 DUSP22Q9NRW4 184 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 COPS7AQ9UBW8 275 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 MGAT4BQ9UQ53 548 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 COMMD3-BMI1R4GMX3 469 aa14.39□□□□□ -0.11
SHOX2-202ENST00000425436 DSPPQ9NZW4 1301 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 A0A1W2PRQ8 180 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 MKRN2OSH3BPM6 223 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 ZNF701M0R085 212 aaPredicted RBP14.38□□□□□ -0.11
SHOX2-202ENST00000425436 ADAP00813 363 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 PDGFAP04085 211 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 ALOX5P09917 674 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 JUNBP17275 347 aaPredicted RBP14.38□□□□□ -0.11
SHOX2-202ENST00000425436 ELK4P28324 431 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 FUT7Q11130 342 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 DGCR6Q14129 220 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 LY6DQ14210 128 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 MEP1AQ16819 746 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 CNPY1Q3B7I2 92 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 ZNF311Q5JNZ3 666 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 FHL5Q5TD97 284 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 AGAP7PQ5VUJ5 663 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 HSDL2Q6YN16 418 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 CTHRC1Q96CG8 243 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 SLC35A4Q96G79 324 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 AGAP4Q96P64 663 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 YIPF3Q9GZM5 350 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 OR10A5Q9H207 317 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 SLC38A1Q9H2H9 487 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 CDCP1Q9H5V8 836 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 EQTNQ9NQ60 294 aa14.38□□□□□ -0.11
SHOX2-202ENST00000425436 ZNF71Q9NQZ8 489 aaPredicted RBP14.38□□□□□ -0.11
SHOX2-202ENST00000425436 TTC36A6NLP5 189 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 J3KTA2 159 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 UGT2B17O75795 530 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 ZFAND5O76080 213 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 ANGPTL1O95841 491 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 CBX7O95931 251 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 F10P00742 488 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 GUSBP08236 651 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 POLR2IP36954 125 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 234 ms