RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 TUBBP07437 444 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 ADH6P28332 368 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 PRKAG1P54619 331 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 RPS4XP62701 263 aaKnown RBP13.31□□□□□ -0.28
ATG4B-209ENST00000425239 ZNF117Q03924 483 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 MLC1Q15049 377 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 TOMM34Q15785 309 aaPredicted RBP13.31□□□□□ -0.28
ATG4B-209ENST00000425239 KLHL26Q53HC5 615 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 CCNJQ5T5M9 372 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 PPP4R4Q6NUP7 873 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 ZCCHC12Q6PEW1 402 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 LRRN4CLQ8ND94 238 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 STEAP2Q8NFT2 490 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 FBXO30Q8TB52 745 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 PIWIL2Q8TC59 973 aaKnown RBP13.31□□□□□ -0.28
ATG4B-209ENST00000425239 OTUB1Q96FW1 271 aaPredicted RBP13.31□□□□□ -0.28
ATG4B-209ENST00000425239 MS4A4EQ96PG1 132 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 CCT7Q99832 543 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 REG4Q9BYZ8 158 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 COQ10BQ9H8M1 238 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 GP6Q9HCN6 339 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 HHATLQ9HCP6 504 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 C1orf109Q9NX04 203 aa13.31□□□□□ -0.28
ATG4B-209ENST00000425239 MAGED1Q9Y5V3 778 aaPredicted RBP13.31□□□□□ -0.28
ATG4B-209ENST00000425239 ESPNB1AK53 854 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 AKAP10O43572 662 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 NDUFS7O75251 213 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 MYL2P10916 166 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 EDNRAP25101 427 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 UGT3A2Q3SY77 523 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.3□□□□□ -0.289e-11■■□□□ 13.2
ATG4B-209ENST00000425239 GTF2IRD2BQ6EKJ0 949 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 GTF2IRD2Q86UP8 949 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 STK32CQ86UX6 486 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 MISPQ8IVT2 679 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 B4GALNT2Q8NHY0 566 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 SMAP2Q8WU79 429 aaPredicted RBP13.3□□□□□ -0.28
ATG4B-209ENST00000425239 HSD17B8Q92506 261 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 FAM120BQ96EK7 910 aaKnown RBP13.3□□□□□ -0.28
ATG4B-209ENST00000425239 ZBED6CLQ96FA7 236 aaPredicted RBP13.3□□□□□ -0.28
ATG4B-209ENST00000425239 TRIM2Q9C040 744 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 SLCO5A1Q9H2Y9 848 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 LRTM1Q9HBL6 345 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 FANCFQ9NPI8 374 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 GIN1Q9NXP7 522 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 KLHL13Q9P2N7 655 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 PSMC3IPQ9P2W1 217 aaPredicted RBP13.3□□□□□ -0.28
ATG4B-209ENST00000425239 TBK1Q9UHD2 729 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 RNF115Q9Y4L5 304 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 ACTL7BQ9Y614 415 aa13.3□□□□□ -0.28
ATG4B-209ENST00000425239 NUP214P35658 2090 aaPredicted RBP13.3□□□□□ -0.28
ATG4B-209ENST00000425239 YLPM1P49750 1951 aaKnown RBP13.29□□□□□ -0.28
ATG4B-209ENST00000425239 NPIPB9F8W1W9 429 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 ETV2O00321 342 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-209ENST00000425239 SLC28A1O00337 649 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 ZNF195O14628 629 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 LSM1O15116 133 aaKnown RBP13.29□□□□□ -0.28
ATG4B-209ENST00000425239 PRKD3O94806 890 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 IGHV4-39P01824 125 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 HMGN2P05204 90 aaKnown RBP13.29□□□□□ -0.28
ATG4B-209ENST00000425239 YES1P07947 543 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 ENPP1P22413 925 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 ELK4P28324 431 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 CRHR1P34998 444 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 GPC1P35052 558 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 SFTPDP35247 375 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 ACVR1BP36896 505 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 CDKN1AP38936 164 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 EIF1P41567 113 aaKnown RBP13.29□□□□□ -0.28
ATG4B-209ENST00000425239 SERPINB4P48594 390 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 ZNF41P51814 821 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-209ENST00000425239 FOXF1Q12946 379 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 RNPS1Q15287 305 aaKnown RBP13.29□□□□□ -0.28
ATG4B-209ENST00000425239 ETFDHQ16134 617 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 ZNF672Q499Z4 452 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-209ENST00000425239 SLC25A53Q5H9E4 307 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 MTERF4Q7Z6M4 381 aaKnown RBP13.29□□□□□ -0.28
ATG4B-209ENST00000425239 FBXO27Q8NI29 283 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 PSMA8Q8TAA3 256 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 GPR119Q8TDV5 335 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 ZNF75CPQ92670 426 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-209ENST00000425239 ANP32BQ92688 251 aaKnown RBP13.29□□□□□ -0.28
ATG4B-209ENST00000425239 FBXW5Q969U6 566 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 CPNE4Q96A23 557 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-209ENST00000425239 PPCDCQ96CD2 204 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 C16orf45Q96MC5 204 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-209ENST00000425239 TSSK3Q96PN8 268 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 STACQ99469 402 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 BTBD2Q9BX70 525 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 GRIP2Q9C0E4 1043 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 PIGUQ9H490 435 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 BCO1Q9HAY6 547 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 DUSP22Q9NRW4 184 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 SH3BP4Q9P0V3 963 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 LIPT1Q9Y234 373 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 DNAJC15Q9Y5T4 150 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 KCNE3Q9Y6H6 103 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 ALPK2Q86TB3 2170 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 ANK2Q01484 3957 aa13.29□□□□□ -0.28
ATG4B-209ENST00000425239 A0A096LNT2 108 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms