RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 LRRC36Q1X8D7 754 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 ISLR2Q6UXK2 745 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 ZDHHC21Q8IVQ6 265 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 AQP12AQ8IXF9 295 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 HS3ST5Q8IZT8 346 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 APOBEC4Q8WW27 367 aaKnown RBP12.28□□□□□ -0.44
PRPF39-202ENST00000424478 PKP2Q99959 881 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.28□□□□□ -0.44
PRPF39-202ENST00000424478 S100A14Q9HCY8 104 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 TEKT2Q9UIF3 430 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 FBXL2Q9UKC9 423 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 MRTO4Q9UKD2 239 aaKnown RBP12.28□□□□□ -0.44
PRPF39-202ENST00000424478 ZNF232Q9UNY5 417 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 ZNF451Q9Y4E5 1061 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 AP4S1Q9Y587 144 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 HTR2AP28223 471 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 ARG2P78540 354 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 CHRNB3Q05901 458 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 FGFBP1Q14512 234 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 IFI44LQ53G44 452 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 ANKRD34AQ69YU3 496 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 CADM2Q8N3J6 435 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 C7orf34Q96L11 122 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 SLC13A4Q9UKG4 626 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 VDAC3Q9Y277 283 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 PCDHGA10Q9Y5H3 936 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 DNAJC13O75165 2243 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 LGI1O95970 557 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 MAGEA8P43361 318 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 PMP22Q01453 160 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 LIN52Q52LA3 116 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 BROXQ5VW32 411 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 HMBOX1Q6NT76 420 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 PSD4Q8NDX1 1056 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 LZICQ8WZA0 190 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 BARD1Q99728 777 aaKnown RBP12.28□□□□□ -0.44
PRPF39-202ENST00000424478 UTP23Q9BRU9 249 aaKnown RBP12.28□□□□□ -0.44
PRPF39-202ENST00000424478 SPATA5L1Q9BVQ7 753 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 FAM117AQ9C073 453 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 NDUFAF4Q9P032 175 aa12.28□□□□□ -0.44
PRPF39-202ENST00000424478 FFAR1O14842 300 aa12.27□□□□□ -0.44
PRPF39-202ENST00000424478 SLC25A12O75746 678 aa12.27□□□□□ -0.44
PRPF39-202ENST00000424478 OPN1LWP04000 364 aa12.27□□□□□ -0.44
PRPF39-202ENST00000424478 UBL4AP11441 157 aa12.27□□□□□ -0.44
PRPF39-202ENST00000424478 CCNA2P20248 432 aa12.27□□□□□ -0.44
PRPF39-202ENST00000424478 TMED10P49755 219 aaKnown RBP12.27□□□□□ -0.44
PRPF39-202ENST00000424478 ZNF136P52737 540 aa12.27□□□□□ -0.44
PRPF39-202ENST00000424478 FAM98BQ52LJ0 330 aaKnown RBP12.27□□□□□ -0.44
PRPF39-202ENST00000424478 FNDC7Q5VTL7 733 aa12.27□□□□□ -0.44
PRPF39-202ENST00000424478 SLC30A8Q8IWU4 369 aa12.27□□□□□ -0.44
PRPF39-202ENST00000424478 TMCO6Q96DC7 493 aa12.27□□□□□ -0.44
PRPF39-202ENST00000424478 PINK1Q9BXM7 581 aa12.27□□□□□ -0.44
PRPF39-202ENST00000424478 MUC13Q9H3R2 512 aa12.27□□□□□ -0.44
PRPF39-202ENST00000424478 CACYBPQ9HB71 228 aaKnown RBP12.27□□□□□ -0.44
PRPF39-202ENST00000424478 CCM2LQ9NUG4 571 aaPredicted RBP12.27□□□□□ -0.44
PRPF39-202ENST00000424478 NBASA2RRP1 2371 aa12.27□□□□□ -0.45
PRPF39-202ENST00000424478 TTC36A6NLP5 189 aa12.27□□□□□ -0.45
PRPF39-202ENST00000424478 ZNHIT1O43257 154 aa12.27□□□□□ -0.45
PRPF39-202ENST00000424478 HLCSP50747 726 aa12.27□□□□□ -0.45
PRPF39-202ENST00000424478 IQCCQ4KMZ1 466 aa12.27□□□□□ -0.45
PRPF39-202ENST00000424478 SLC22A10Q63ZE4 541 aa12.27□□□□□ -0.45
PRPF39-202ENST00000424478 JMJD6Q6NYC1 403 aaPredicted RBP12.27□□□□□ -0.45
PRPF39-202ENST00000424478 ARSKQ6UWY0 536 aa12.27□□□□□ -0.45
PRPF39-202ENST00000424478 GALNTL5Q7Z4T8 443 aa12.27□□□□□ -0.45
PRPF39-202ENST00000424478 METTL25Q8N6Q8 603 aa12.27□□□□□ -0.45
PRPF39-202ENST00000424478 IFNA14P01570 189 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 SEMG1P04279 462 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 PRKAR1BP31321 381 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 TMPRSS3P57727 454 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 TXNL4AP83876 142 aaKnown RBP12.26□□□□□ -0.45
PRPF39-202ENST00000424478 TBR1Q16650 682 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 COL28A1Q2UY09 1125 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 NUP54Q7Z3B4 507 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 ZNF527Q8NB42 609 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 TSPAN10Q9H1Z9 355 aaPredicted RBP12.26□□□□□ -0.45
PRPF39-202ENST00000424478 CNOT11Q9UKZ1 510 aaKnown RBP12.26□□□□□ -0.45
PRPF39-202ENST00000424478 BAG5Q9UL15 447 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 IFT52Q9Y366 437 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 IGSF10Q6WRI0 2623 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 ALG1L2C9J202 215 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 WISP2O76076 250 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 THY1P04216 161 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 FABP3P05413 133 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 RFPL3SP0C7P2 107 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 GAS1P54826 345 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 AP2B1P63010 937 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 SKP2Q13309 424 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 MTX3Q5HYI7 312 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 PRAMEF8Q5VWM4 474 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 PRAMEF7Q5VXH5 474 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 TMEM179BQ7Z7N9 219 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 EID3Q8N140 333 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 ARMC10Q8N2F6 343 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 WDSUB1Q8N9V3 476 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 ICA1LQ8NDH6 482 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 ABHD17AQ96GS6 310 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 OSBPL11Q9BXB4 747 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 UGT2B28Q9BY64 529 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 DSN1Q9H410 356 aa12.26□□□□□ -0.45
PRPF39-202ENST00000424478 ZMIZ1Q9ULJ6 1067 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms