RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 CEP112Q8N8E3 955 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.79□□□□□ -0.042e-6■■■■■ 45.7
CHCHD3-202ENST00000423635 FAM110BQ8TC76 370 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 FBXO25Q8TCJ0 367 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 PIK3R3Q92569 461 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 AMDHD1Q96NU7 426 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 KLHDC3Q9BQ90 382 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 MRPL57Q9BQC6 102 aaKnown RBP14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 BCO1Q9HAY6 547 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 ING1Q9UK53 422 aaPredicted RBP14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 KCNS2Q9ULS6 477 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 MGAT4BQ9UQ53 548 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 PLCE1Q9P212 2302 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 SLC35F4A4IF30 521 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 LYZL6O75951 148 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 NKX2-2O95096 273 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 ANXA4P09525 319 aaPredicted RBP14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 CSF3P09919 207 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 SBK3P0C264 359 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 ELK4P28324 431 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 SFTPDP35247 375 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 OR3A2P47893 321 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 SQLEQ14534 574 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 RASA2Q15283 850 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 STK11Q15831 433 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 FAM166AQ6J272 317 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 MISPQ8IVT2 679 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 HTRA1Q92743 480 aa14.78□□□□□ -0.04
CHCHD3-202ENST00000423635 SERTM1A2A2V5 107 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 A8MT66 165 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 RAD51CO43502 376 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 GGT1P19440 569 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 LCN1P31025 176 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 EFNA4P52798 201 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 ZNF763Q0D2J5 394 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 UAP1Q16222 522 aaPredicted RBP14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 FAM71E1Q6IPT2 247 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 IL17RELQ6ZVW7 336 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 FBXL14Q8N1E6 418 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 GATSQ8NAP1 163 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 B4GALNT2Q8NHY0 566 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 METTL6Q8TCB7 284 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 GPR151Q8TDV0 419 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 PSD2Q9BQI7 771 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 EBPLQ9BY08 206 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 MRPL46Q9H2W6 279 aaKnown RBP14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 PRSS50Q9UI38 385 aa14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 WBP11Q9Y2W2 641 aaKnown RBP14.77□□□□□ -0.04
CHCHD3-202ENST00000423635 A0A1W2PQD3 144 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 GJE1A6NN92 205 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 VWC2LB2RUY7 222 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 ZNF195O14628 629 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 RGS14O43566 566 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 PRPS2P11908 318 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 COX5AP20674 150 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 ENPP1P22413 925 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 IGHV1-2P23083 117 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 PTAFRP25105 342 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 NTSP30990 170 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 TRADDQ15628 312 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 VPS26BQ4G0F5 336 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 ARL13AQ5H913 290 aaPredicted RBP14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 UBAP2Q5T6F2 1119 aaKnown RBP14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 ZNF544Q6NX49 715 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 ZDHHC24Q6UX98 284 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 TMEM108Q6UXF1 575 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 MMGT1Q8N4V1 131 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 MSI2Q96DH6 328 aaKnown RBP14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 SH3YL1Q96HL8 342 aaPredicted RBP14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 ZNF382Q96SR6 550 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 CXorf36Q9H7Y0 433 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 COQ10BQ9H8M1 238 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 MIEF1Q9NQG6 463 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 UBQLN4Q9NRR5 601 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 KLHL9Q9P2J3 617 aa14.76□□□□□ -0.05
CHCHD3-202ENST00000423635 LOC100289279A0A1B0GTE1 492 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 OR5H1A6NKK0 313 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 HNF1AP20823 631 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 HTR6P50406 440 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 FABP6P51161 128 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 RAC3P60763 192 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 BTKQ06187 659 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 FOXF1Q12946 379 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 TMEM176BQ3YBM2 270 aaPredicted RBP14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 UNC50Q53HI1 259 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 SLC22A25Q6T423 547 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 ZAR1Q86SH2 424 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 CDRT4Q8N9R6 151 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 OR6Y1Q8NGX8 325 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 PLA2G12AQ9BZM1 189 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 CHODLQ9H9P2 273 aa14.75□□□□□ -0.05
CHCHD3-202ENST00000423635 KIF2AO00139 706 aaPredicted RBP14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 SUPT7LO94864 414 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 KCNK2O95069 426 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 DHRS4L1P0CG22 281 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 BMP4P12644 408 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 HPGDP15428 266 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 EDNRAP25101 427 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 CD40P25942 277 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 HMOX2P30519 316 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms