RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ZCCHC12Q6PEW1 402 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 BTLAQ7Z6A9 289 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 GGNQ86UU5 652 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 METTL25Q8N6Q8 603 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 RFWD2Q8NHY2 731 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 PSMA8Q8TAA3 256 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 OR5P2Q8WZ92 322 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 NINJ1Q92982 152 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 COQ8BQ96D53 544 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 STACQ99469 402 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 EBF4Q9BQW3 602 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 BTBD2Q9BX70 525 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 OPN3Q9H1Y3 402 aaPredicted RBP13.66□□□□□ -0.22
USB1-202ENST00000423271 DUSP22Q9NRW4 184 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 GPATCH2Q9NW75 528 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 GIN1Q9NXP7 522 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 ZNF175Q9Y473 711 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 GPR45Q9Y5Y3 372 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 AP4B1Q9Y6B7 739 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 KCNE3Q9Y6H6 103 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 MSTNO14793 375 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 POLR3GO15318 223 aaPredicted RBP13.65□□□□□ -0.22
USB1-202ENST00000423271 AQP8O94778 261 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 OPN1LWP04000 364 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 CRHP06850 196 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 CD1EP15812 388 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 ZNF17P17021 662 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 MDH1P40925 334 aaKnown RBP13.65□□□□□ -0.22
USB1-202ENST00000423271 CCT3P49368 545 aaKnown RBP13.65□□□□□ -0.22
USB1-202ENST00000423271 UFM1P61960 85 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 FAM27E3Q08E93 113 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 PGS1Q32NB8 556 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 PLPPR5Q32ZL2 321 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 SPDYE7PQ495Y7 208 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 FBXW10Q5XX13 1052 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 CAMKMTQ7Z624 323 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 OR56A1Q8NGH5 318 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 OR5AK3PQ8NH89 298 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 PRPF18Q99633 342 aaKnown RBP13.65□□□□□ -0.22
USB1-202ENST00000423271 PIGUQ9H490 435 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 RNF122Q9H9V4 155 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 NPHS2Q9NP85 383 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 TCF7L2Q9NQB0 619 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 UBQLN4Q9NRR5 601 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 MED17Q9NVC6 651 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 ATAD3AQ9NVI7 634 aa13.65□□□□□ -0.22
USB1-202ENST00000423271 SETD2Q9BYW2 2564 aaPredicted RBP13.65□□□□□ -0.22
USB1-202ENST00000423271 ACANP16112 2415 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 A0A087WZY1 265 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 A0A1W2PPR1 153 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 SH3D21A4FU49 640 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 C9JVG2 144 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 E9PBE3 544 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 SCDO00767 359 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 EIF1AYO14602 144 aaKnown RBP13.64□□□□□ -0.23
USB1-202ENST00000423271 UBDO15205 165 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 OIP5O43482 229 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 HRGP04196 525 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 HPGDP15428 266 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 PSMA4P25789 261 aaKnown RBP13.64□□□□□ -0.23
USB1-202ENST00000423271 LCN1P31025 176 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 CCKARP32238 428 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 EIF1AXP47813 144 aaKnown RBP13.64□□□□□ -0.23
USB1-202ENST00000423271 SLC6A8P48029 635 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 RPS3AP61247 264 aaKnown RBP13.64□□□□□ -0.23
USB1-202ENST00000423271 EEF1A1P68104 462 aaKnown RBP13.64□□□□□ -0.23
USB1-202ENST00000423271 GUSBP1Q15486 140 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 DCST2Q5T1A1 773 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 EEF1A1P5Q5VTE0 462 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 OR4F3Q6IEY1 312 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 PPP4R4Q6NUP7 873 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 ZNF474Q6S9Z5 364 aaPredicted RBP13.64□□□□□ -0.23
USB1-202ENST00000423271 PAMR1Q6UXH9 720 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 GTPBP8Q8N3Z3 284 aaPredicted RBP13.64□□□□□ -0.23
USB1-202ENST00000423271 POC1BQ8TC44 478 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 SFXN5Q8TD22 340 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 ADGRG7Q96K78 797 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 TEX37Q96LM6 180 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 RNF145Q96MT1 663 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 DACH2Q96NX9 599 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 FOXC2Q99958 501 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 CCDC28BQ9BUN5 200 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 DUSP26Q9BV47 211 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 ACTRT3Q9BYD9 372 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 BHLHE41Q9C0J9 482 aaPredicted RBP13.64□□□□□ -0.23
USB1-202ENST00000423271 CXXC4Q9H2H0 198 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 CCDC134Q9H6E4 229 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 TMEM185BQ9H7F4 350 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 DCTN4Q9UJW0 460 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 TESMINQ9Y4I5 508 aa13.64□□□□□ -0.23
USB1-202ENST00000423271 A0A1W2PQD3 144 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 C7orf72A4D263 438 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 CFLARO15519 480 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 CGAP01215 116 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 VIMP08670 466 aaKnown RBP13.63□□□□□ -0.23
USB1-202ENST00000423271 IDO1P14902 403 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 IL11P20809 199 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 IL12AP29459 219 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 SOAT1P35610 550 aa13.63□□□□□ -0.23
USB1-202ENST00000423271 ZNF41P51814 821 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms