RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 CCDC115Q96NT0 180 aa19.75■□□□□ 0.75
TRAF4-204ENST00000422344 OR52E6Q96RD3 313 aa19.75■□□□□ 0.75
TRAF4-204ENST00000422344 PANX1Q96RD7 426 aa19.75■□□□□ 0.75
TRAF4-204ENST00000422344 SDF2Q99470 211 aa19.75■□□□□ 0.75
TRAF4-204ENST00000422344 SH3GL2Q99962 352 aa19.75■□□□□ 0.75
TRAF4-204ENST00000422344 SLC35A5Q9BS91 424 aa19.75■□□□□ 0.75
TRAF4-204ENST00000422344 PINK1Q9BXM7 581 aa19.75■□□□□ 0.75
TRAF4-204ENST00000422344 OR51I1Q9H343 314 aa19.75■□□□□ 0.75
TRAF4-204ENST00000422344 SERHL2Q9H4I8 314 aa19.75■□□□□ 0.75
TRAF4-204ENST00000422344 MED17Q9NVC6 651 aa19.75■□□□□ 0.75
TRAF4-204ENST00000422344 BTNL2Q9UIR0 455 aa19.75■□□□□ 0.75
TRAF4-204ENST00000422344 L3MBTL1Q9Y468 752 aa19.75■□□□□ 0.75
TRAF4-204ENST00000422344 C9JVG2 144 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 STX11O75558 287 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 TGM6O95932 706 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 PGRP06401 933 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 CD1EP15812 388 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 ME2P23368 584 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 KIR2DL3P43628 341 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 KHKP50053 298 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 SUCLG1P53597 346 aaKnown RBP19.74■□□□□ 0.75
TRAF4-204ENST00000422344 CASP9P55211 416 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 CLDN20P56880 219 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 ZNF117Q03924 483 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 FOXF2Q12947 444 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 SGCBQ16585 318 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 TMEM44Q2T9K0 475 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 SLC9B1Q4ZJI4 515 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 GTPBP8Q8N3Z3 284 aaPredicted RBP19.74■□□□□ 0.75
TRAF4-204ENST00000422344 CHDHQ8NE62 594 aaPredicted RBP19.74■□□□□ 0.75
TRAF4-204ENST00000422344 MIPOL1Q8TD10 442 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 MAELQ96JY0 434 aaKnown RBP19.74■□□□□ 0.75
TRAF4-204ENST00000422344 DTNAQ9Y4J8 743 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 NAV3Q8IVL0 2385 aa19.74■□□□□ 0.75
TRAF4-204ENST00000422344 NIPBLQ6KC79 2804 aaeCLIP19.74■□□□□ 0.752e-8■■■□□ 17.1
TRAF4-204ENST00000422344 NUP214P35658 2090 aaPredicted RBP19.73■□□□□ 0.75
TRAF4-204ENST00000422344 C7orf72A4D263 438 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 H0YC42 278 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 EIF1AYO14602 144 aaKnown RBP19.73■□□□□ 0.75
TRAF4-204ENST00000422344 TNFRSF21O75509 655 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 SLC22A3O75751 556 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 OR12D1P0DN82 309 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 CPA2P48052 419 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 ART1P52961 327 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 TPD52P55327 224 aaPredicted RBP19.73■□□□□ 0.75
TRAF4-204ENST00000422344 SUMO3P55854 103 aaPredicted RBP19.73■□□□□ 0.75
TRAF4-204ENST00000422344 GPR68Q15743 365 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 GSTA3Q16772 222 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 PLPPR5Q32ZL2 321 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 ARHGAP11BQ3KRB8 267 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 PDCD4Q53EL6 469 aaKnown RBP19.73■□□□□ 0.75
TRAF4-204ENST00000422344 TTMPQ5BVD1 217 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 SAXO2Q658L1 398 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 PPP4R4Q6NUP7 873 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 TNFAIP8L2Q6P589 184 aaPredicted RBP19.73■□□□□ 0.75
TRAF4-204ENST00000422344 KIF18BQ86Y91 864 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 TMCO5AQ8N6Q1 288 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 XAGE5Q8WWM1 108 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 NEURL3Q96EH8 262 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 MARK4Q96L34 752 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 RNF145Q96MT1 663 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 C7orf26Q96N11 449 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 NMUR2Q9GZQ4 415 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 PIGMQ9H3S5 423 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 CARD8Q9Y2G2 431 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 ZNF175Q9Y473 711 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 USH1CQ9Y6N9 552 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 DOCK7Q96N67 2140 aa19.73■□□□□ 0.75
TRAF4-204ENST00000422344 CCDC154A6NI56 674 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 UBDO15205 165 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 IL12AP29459 219 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 EIF1P41567 113 aaKnown RBP19.72■□□□□ 0.75
TRAF4-204ENST00000422344 ANXA11P50995 505 aaKnown RBP19.72■□□□□ 0.75
TRAF4-204ENST00000422344 P2RX1P51575 399 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 CLDN15P56746 228 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 HPCAP84074 193 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 SNTB1Q13884 538 aaKnown RBP19.72■□□□□ 0.75
TRAF4-204ENST00000422344 PON3Q15166 354 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 KRTAP21-3Q3LHN1 58 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.72■□□□□ 0.751e-8■■■□□ 18
TRAF4-204ENST00000422344 MAVSQ7Z434 540 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 TMEM200AQ86VY9 491 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 RAB8BQ92930 207 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 VIPAS39Q9H9C1 493 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 PACSIN3Q9UKS6 424 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 MKLN1Q9UL63 735 aa19.72■□□□□ 0.75
TRAF4-204ENST00000422344 HMGB1P1B2RPK0 211 aaPredicted RBP19.71■□□□□ 0.75
TRAF4-204ENST00000422344 NPIPB9F8W1W9 429 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 IL6P05231 212 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 CRHP06850 196 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 UBL4AP11441 157 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 FCGR2AP12318 317 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 EIF1AXP47813 144 aaKnown RBP19.71■□□□□ 0.75
TRAF4-204ENST00000422344 CCR4P51679 360 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 PDZK1Q5T2W1 519 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 CBLN3Q6UW01 205 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 ZNF621Q6ZSS3 439 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 LUZP2Q86TE4 346 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 GGNQ86UU5 652 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 ZZZ3Q8IYH5 903 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms