RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 NEUROD4Q9HD90 331 aa8.47□□□□□ -1.05
NUP50-205ENST00000419387 PLSCR4Q9NRQ2 329 aa8.47□□□□□ -1.05
NUP50-205ENST00000419387 DUSP22Q9NRW4 184 aa8.47□□□□□ -1.05
NUP50-205ENST00000419387 MED17Q9NVC6 651 aa8.47□□□□□ -1.05
NUP50-205ENST00000419387 ATAD3AQ9NVI7 634 aa8.47□□□□□ -1.05
NUP50-205ENST00000419387 KLHL28Q9NXS3 571 aa8.47□□□□□ -1.05
NUP50-205ENST00000419387 ZNF226Q9NYT6 803 aa8.47□□□□□ -1.05
NUP50-205ENST00000419387 SNX8Q9Y5X2 465 aa8.47□□□□□ -1.05
NUP50-205ENST00000419387 ABCA4P78363 2273 aa8.47□□□□□ -1.05
NUP50-205ENST00000419387 ITPR3Q14573 2671 aa8.47□□□□□ -1.05
NUP50-205ENST00000419387 ZNF469Q96JG9 3925 aaPredicted RBP8.46□□□□□ -1.05
NUP50-205ENST00000419387 ZFHX3Q15911 3703 aa8.46□□□□□ -1.05
NUP50-205ENST00000419387 UQCRHLA0A096LP55 91 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 ADAMDEC1O15204 470 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 ITM2AO43736 263 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 DIAPH2O60879 1101 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 SOX30O94993 753 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 OPN1LWP04000 364 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 CD53P19397 219 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 IL11P20809 199 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 ATP6V1C1P21283 382 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 CRYGSP22914 178 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 PSMA4P25789 261 aaKnown RBP8.46□□□□□ -1.06
NUP50-205ENST00000419387 UGT2B10P36537 528 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 SLC6A8P48029 635 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 ZNF41P51814 821 aaPredicted RBP8.46□□□□□ -1.06
NUP50-205ENST00000419387 PTGR1Q14914 329 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 CD226Q15762 336 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 PLPPR5Q32ZL2 321 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 PDSS1Q5T2R2 415 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 PPP4R4Q6NUP7 873 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 ESPNLQ6ZVH7 1005 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 MTERF4Q7Z6M4 381 aaKnown RBP8.46□□□□□ -1.06
NUP50-205ENST00000419387 NUDCD3Q8IVD9 361 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 KRTCAP2Q8N6L1 136 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 OR56A1Q8NGH5 318 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 OR10D3Q8NH80 312 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 OR2V1Q8NHB1 315 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 B4GALNT2Q8NHY0 566 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 POC1BQ8TC44 478 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 ADAMTS15Q8TE58 950 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 NUDT8Q8WV74 236 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 CDS1Q92903 461 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 SH3YL1Q96HL8 342 aaPredicted RBP8.46□□□□□ -1.06
NUP50-205ENST00000419387 GMPPAQ96IJ6 420 aaPredicted RBP8.46□□□□□ -1.06
NUP50-205ENST00000419387 ADGRG7Q96K78 797 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 RNF145Q96MT1 663 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 ACTRT3Q9BYD9 372 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 HOXD1Q9GZZ0 328 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 CENPHQ9H3R5 247 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 CXorf36Q9H7Y0 433 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 GLRX2Q9NS18 164 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 BEX4Q9NWD9 120 aaPredicted RBP8.46□□□□□ -1.06
NUP50-205ENST00000419387 C6orf203Q9P0P8 240 aaPredicted RBP8.46□□□□□ -1.06
NUP50-205ENST00000419387 MCTS1Q9ULC4 181 aaKnown RBP8.46□□□□□ -1.06
NUP50-205ENST00000419387 FAF1Q9UNN5 650 aaPredicted RBP8.46□□□□□ -1.06
NUP50-205ENST00000419387 EMC9Q9Y3B6 208 aa8.46□□□□□ -1.06
NUP50-205ENST00000419387 NUP214P35658 2090 aaPredicted RBP8.45□□□□□ -1.06
NUP50-205ENST00000419387 A0A0J9YW62 118 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 TMEM120BA0PK00 339 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 DEFB108AA8MXU0 73 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 TNFSF11O14788 317 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 TM9SF1O15321 606 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 BIRC5O15392 142 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 SIAH2O43255 324 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 CXCL13O43927 109 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 SS18L1O75177 396 aaPredicted RBP8.45□□□□□ -1.06
NUP50-205ENST00000419387 SKAP2O75563 359 aaPredicted RBP8.45□□□□□ -1.06
NUP50-205ENST00000419387 SYNGR4O95473 234 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 C6orf47O95873 294 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 PLGP00747 810 aaPredicted RBP8.45□□□□□ -1.06
NUP50-205ENST00000419387 KRT16P08779 473 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 LINGO3P0C6S8 592 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 FOSL1P15407 271 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 PRPS1L1P21108 318 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 ME2P23368 584 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 HOXC12P31275 282 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 EIF1P41567 113 aaKnown RBP8.45□□□□□ -1.06
NUP50-205ENST00000419387 CTBP2P56545 445 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 EMX2Q04743 252 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 MAD2L1Q13257 205 aaPredicted RBP8.45□□□□□ -1.06
NUP50-205ENST00000419387 TP53BP2Q13625 1128 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 EXOC3L2Q2M3D2 409 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 CTU2Q2VPK5 515 aaKnown RBP8.45□□□□□ -1.06
NUP50-205ENST00000419387 SPDYE7PQ495Y7 208 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 KLHL26Q53HC5 615 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 DCST2Q5T1A1 773 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 ZNF550Q7Z398 422 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 RIMKLAQ8IXN7 391 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 LILRA2Q8N149 483 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 ZNF527Q8NB42 609 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 OR6K3Q8NGY3 331 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 PHOSPHO1Q8TCT1 267 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 SFXN5Q8TD22 340 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 OSTF1Q92882 214 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 MOAP1Q96BY2 351 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 TUBGCP3Q96CW5 907 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 PIK3IP1Q96FE7 263 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 PKNOX2Q96KN3 472 aa8.45□□□□□ -1.06
NUP50-205ENST00000419387 ATP6V1G3Q96LB4 118 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms