RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 IRAK3Q9Y616 596 aa13.74□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR2AG2A6NM03 316 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 SGCEO43556 437 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 FRS3O43559 492 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 IGLV3-27P01718 113 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 CKMP06732 381 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 PPP3CBP16298 524 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 PVALBP20472 110 aaPredicted RBP13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 PAICSP22234 425 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 HAAOP46952 286 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 RAB13P51153 203 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 CCR8P51685 355 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 MANFP55145 182 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 RPTNQ6XPR3 784 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 SERPINA12Q8IW75 414 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 KCT2Q8NC54 265 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR4D10Q8NGI6 311 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 DNTTIP1Q9H147 329 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZDHHC3Q9NYG2 299 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 IL20Q9NYY1 176 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 CA5BQ9Y2D0 317 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 TRBV5-4A0A0C4DH59 114 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 DISC1C4P0D8 188 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 GPR31O00270 319 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 KHDRBS3O75525 346 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR5F1O95221 314 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 PTGER1P34995 402 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 AHRP35869 848 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 TRIM23P36406 574 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 PITPNAQ00169 270 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF697Q5TEC3 545 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 LYPLAL1Q5VWZ2 237 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC6A19Q695T7 634 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 GRHL2Q6ISB3 625 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 APOOLQ6UXV4 268 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 IKBIPQ70UQ0 350 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 CBLN2Q8IUK8 224 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 BPIFCQ8NFQ6 507 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR10H4Q8NGA5 316 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR5D16Q8NGK9 328 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR6T1Q8NGN1 323 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 WFDC5Q8TCV5 224 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 SMAP2Q8WU79 429 aaPredicted RBP13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 SORCS1Q8WY21 1168 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 WNT2BQ93097 391 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF607Q96SK3 696 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 TSNAXQ99598 290 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 CMSS1Q9BQ75 279 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 MED20Q9H944 212 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 NOX3Q9HBY0 568 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 CTSFQ9UBX1 484 aa13.73□□□□□ -0.21
NCKIPSD-204ENST00000416649 HELZP42694 1942 aaKnown RBP13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 E9PI62 339 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF197O14709 1029 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 PTHLHP12272 177 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 GABRR2P28476 465 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 KCNJ5P48544 419 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 KCNJ3P48549 501 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 MMP15P51511 669 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 RAP2BP61225 183 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 NDUFA9Q16795 377 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC25A30Q5SVS4 291 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 NEIL2Q969S2 332 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC19A3Q9BZV2 496 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC22A11Q9NSA0 550 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 MRPS18AQ9NVS2 196 aaKnown RBP13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 H0YIV9 168 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 CREBL2O60519 120 aaPredicted RBP13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 FMO6PO60774 539 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC16A8O95907 504 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 NR2F1P10589 423 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 RAG2P55895 527 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 TNFRSF17Q02223 184 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 RING1Q06587 406 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 KLF9Q13886 244 aaPredicted RBP13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 MED27Q6P2C8 311 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC16A13Q7RTY0 426 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 CPOQ8IVL8 374 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 SLC39A11Q8N1S5 342 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 PXT1Q8NFP0 134 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR5M1Q8NGP8 315 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 GNPDA2Q8TDQ7 276 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 FGF11Q92914 225 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 KCTD12Q96CX2 325 aaKnown RBP13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 ALG8Q9BVK2 526 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 MRPL17Q9NRX2 175 aaKnown RBP13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 SAGE1Q9NXZ1 904 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 SPG21Q9NZD8 308 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR10H1Q9Y4A9 318 aa13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 COL4A4P53420 1690 aaPredicted RBP13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 SPTBN5Q9NRC6 3674 aaKnown RBP13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 ARID1BQ8NFD5 2236 aaPredicted RBP13.72□□□□□ -0.21
NCKIPSD-204ENST00000416649 A0A1W2PRU2 124 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 NPIPB15A6NHN6 443 aaPredicted RBP13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 TBL1XO60907 577 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 MRPL3P09001 348 aaKnown RBP13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 UQCRC2P22695 453 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 ACADLP28330 430 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 STXBP1P61764 594 aaKnown RBP13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 EFNB1P98172 346 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms