RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 CARD8Q9Y2G2 431 aa11.98□□□□□ -0.49
CNOT4-204ENST00000414802 KIAA1549Q9HCM3 1950 aa11.98□□□□□ -0.49
CNOT4-204ENST00000414802 IGSF10Q6WRI0 2623 aa11.98□□□□□ -0.49
CNOT4-204ENST00000414802 ZGRF1Q86YA3 2104 aa11.98□□□□□ -0.49
CNOT4-204ENST00000414802 GTPBP1O00178 669 aaKnown RBP11.97□□□□□ -0.49
CNOT4-204ENST00000414802 SUV39H1O43463 412 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 STAMBPO95630 424 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 FESP07332 822 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 GKN3PP0CG01 181 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 CD46P15529 392 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 PRKAR1BP31321 381 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 MEOX1P50221 254 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 HOXC5Q00444 222 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 PMP22Q01453 160 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 CBLN3Q6UW01 205 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 EIF3MQ7L2H7 374 aaKnown RBP11.97□□□□□ -0.49
CNOT4-204ENST00000414802 SPATA24Q86W54 205 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 LACC1Q8IV20 430 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 SULF2Q8IWU5 870 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 EXD3Q8N9H8 876 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 OR4D11Q8NGI4 311 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 DUSP19Q8WTR2 217 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 PMM1Q92871 262 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 SCMH1Q96GD3 660 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 TRIM15Q9C019 465 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 RYDENQ9NUL5 291 aaKnown RBP11.97□□□□□ -0.49
CNOT4-204ENST00000414802 ADPRHL2Q9NX46 363 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 TUBA8Q9NY65 449 aaPredicted RBP11.97□□□□□ -0.49
CNOT4-204ENST00000414802 ZNF232Q9UNY5 417 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 GTF3C1Q12789 2109 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 COL6A6A6NMZ7 2263 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 TRAV17A0A0B4J275 112 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 CDHR4A6H8M9 788 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 CFAP73A6NFT4 308 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 H3BNH8 94 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 HCRTR2O43614 444 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 PEX1O43933 1283 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 PRKD3O94806 890 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 IFNA14P01570 189 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 TCEA1P23193 301 aaKnown RBP11.97□□□□□ -0.49
CNOT4-204ENST00000414802 OR1E2P47887 323 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 MASP1P48740 699 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 RHDQ02161 417 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 SKP2Q13309 424 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 SNTA1Q13424 505 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 CCNIQ14094 377 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 KPNB1Q14974 876 aaKnown RBP11.97□□□□□ -0.49
CNOT4-204ENST00000414802 EIPR1Q53HC9 387 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 SLC30A6Q6NXT4 461 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 TMEM81Q6P7N7 255 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 IGFL3Q6UXB1 125 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 RBM45Q8IUH3 476 aaKnown RBP11.97□□□□□ -0.49
CNOT4-204ENST00000414802 OR2M7Q8NG81 312 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 RNF145Q96MT1 663 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 MED11Q9P086 117 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 RPS6KA6Q9UK32 745 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 SAMD4AQ9UPU9 718 aaKnown RBP11.97□□□□□ -0.49
CNOT4-204ENST00000414802 SLC35A3Q9Y2D2 325 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 NTNG1Q9Y2I2 539 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 KLF13Q9Y2Y9 288 aaPredicted RBP11.97□□□□□ -0.49
CNOT4-204ENST00000414802 PCDHGB7Q9Y5F8 929 aa11.97□□□□□ -0.49
CNOT4-204ENST00000414802 LRRC3CA6NJW4 275 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 AP3D1O14617 1153 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 SNPHO15079 494 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 ZNF264O43296 627 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 ADAM11O75078 769 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 PRG2P13727 222 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 CNR1P21554 472 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 SELENOWP63302 87 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 ZNF169Q14929 603 aaPredicted RBP11.96□□□□□ -0.5
CNOT4-204ENST00000414802 NRF1Q16656 503 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 CARM1Q86X55 608 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 EID3Q8N140 333 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 TMEM178AQ8NBL3 297 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 FAM71CQ8NEG0 241 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 PROX1Q92786 737 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 NTNG2Q96CW9 530 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 ZNF597Q96LX8 424 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 SEPHS2Q99611 448 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 ARHGDIGQ99819 225 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 FAM173AQ9BQD7 235 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 PRR14Q9BWN1 585 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 DSN1Q9H410 356 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 OLAHQ9NV23 265 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 FBXL2Q9UKC9 423 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 SLC13A4Q9UKG4 626 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 SH3GLB1Q9Y371 365 aa11.96□□□□□ -0.5
CNOT4-204ENST00000414802 ANKRD33BA6NCL7 494 aa11.95□□□□□ -0.5
CNOT4-204ENST00000414802 FAM166BA8MTA8 275 aa11.95□□□□□ -0.5
CNOT4-204ENST00000414802 CDK2AP1O14519 115 aa11.95□□□□□ -0.5
CNOT4-204ENST00000414802 CDC40O60508 579 aaKnown RBP eCLIP11.95□□□□□ -0.5
CNOT4-204ENST00000414802 DPM1O60762 260 aa11.95□□□□□ -0.5
CNOT4-204ENST00000414802 TRIM3O75382 744 aaPredicted RBP11.95□□□□□ -0.5
CNOT4-204ENST00000414802 LGI1O95970 557 aa11.95□□□□□ -0.5
CNOT4-204ENST00000414802 MT-ND1P03886 318 aa11.95□□□□□ -0.5
CNOT4-204ENST00000414802 RYKP34925 604 aa11.95□□□□□ -0.5
CNOT4-204ENST00000414802 RGS8P57771 180 aaPredicted RBP11.95□□□□□ -0.5
CNOT4-204ENST00000414802 LY6DQ14210 128 aa11.95□□□□□ -0.5
CNOT4-204ENST00000414802 NPTX1Q15818 432 aa11.95□□□□□ -0.5
CNOT4-204ENST00000414802 NADK2Q4G0N4 442 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms