RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 H3BMQ9 156 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 SGK494L7N484 410 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 HCRTR1O43613 425 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 COQ9O75208 318 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 GASTP01350 101 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 ALOX5P09917 674 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 SLC35E2P0CK97 266 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 RNH1P13489 461 aaKnown RBP15.81■□□□□ 0.12
PTPRC-206ENST00000413409 NT5EP21589 574 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 RPS4Y1P22090 263 aaKnown RBP15.81■□□□□ 0.12
PTPRC-206ENST00000413409 GABRA4P48169 554 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 EMP3P54852 163 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 MGAT2Q10469 447 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 FAM53BQ14153 422 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 SEC23BQ15437 767 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 NPTX1Q15818 432 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 DUSP5Q16690 384 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 PRICKLE4Q2TBC4 344 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 EIPR1Q53HC9 387 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 SNAP47Q5SQN1 464 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 GPR107Q5VW38 600 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 OR4N5Q8IXE1 308 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 ESX1Q8N693 406 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 SLC16A11Q8NCK7 471 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 OR6T1Q8NGN1 323 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 RAB2BQ8WUD1 216 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 HOXB13Q92826 284 aaPredicted RBP15.81■□□□□ 0.12
PTPRC-206ENST00000413409 CDS1Q92903 461 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 GTPBP3Q969Y2 492 aaKnown RBP15.81■□□□□ 0.12
PTPRC-206ENST00000413409 ANKRD9Q96BM1 317 aaPredicted RBP15.81■□□□□ 0.12
PTPRC-206ENST00000413409 CTHRC1Q96CG8 243 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 COG8Q96MW5 612 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 MAP3K3Q99759 626 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 ZPBPQ9BS86 351 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 ZNF350Q9GZX5 532 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 LHPPQ9H008 270 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 MTHFD2LQ9H903 347 aaPredicted RBP15.81■□□□□ 0.12
PTPRC-206ENST00000413409 ANKRA2Q9H9E1 313 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 POLE3Q9NRF9 147 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 ENAMQ9NRM1 1142 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 MAN2C1Q9NTJ4 1040 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 FKBP14Q9NWM8 211 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 IMPAD1Q9NX62 359 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 SLC5A6Q9Y289 635 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 MRPS33Q9Y291 106 aaKnown RBP15.81■□□□□ 0.12
PTPRC-206ENST00000413409 ZNF443Q9Y2A4 671 aaPredicted RBP15.81■□□□□ 0.12
PTPRC-206ENST00000413409 PCDHGA10Q9Y5H3 936 aa15.81■□□□□ 0.12
PTPRC-206ENST00000413409 ZNF99A8MXY4 864 aaPredicted RBP15.8■□□□□ 0.12
PTPRC-206ENST00000413409 PTGES3LE9PB15 166 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 CHST10O43529 356 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 OR10H3O60404 316 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 NSA2O95478 260 aaKnown RBP15.8■□□□□ 0.12
PTPRC-206ENST00000413409 MT-ND2P03891 347 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 GUSBP08236 651 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 ZNF28P17035 718 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 FUT4P22083 530 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 CHMP24386 653 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 PCSK6P29122 969 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 MAP3K8P41279 467 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 IGLV3-21P80748 117 aaPredicted RBP15.8■□□□□ 0.12
PTPRC-206ENST00000413409 COX10Q12887 443 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 TCTE1Q5JU00 501 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 TYW3Q6IPR3 259 aaKnown RBP15.8■□□□□ 0.12
PTPRC-206ENST00000413409 Q6ZPB1 254 aaPredicted RBP15.8■□□□□ 0.12
PTPRC-206ENST00000413409 OLIG3Q7RTU3 272 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 PEX5LQ8IYB4 626 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 ZNF540Q8NDQ6 660 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 OR9A4Q8NGU2 314 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 OR52P1PQ8NH57 321 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 SLC7A13Q8TCU3 470 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 FAR1Q8WVX9 515 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 FCGR1BQ92637 280 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 C5orf34Q96MH7 638 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 DPYSL5Q9BPU6 564 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 WFDC6Q9BQY6 131 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 POLR2J2Q9GZM3 115 aaKnown RBP15.8■□□□□ 0.12
PTPRC-206ENST00000413409 POLR2J3Q9H1A7 115 aaKnown RBP15.8■□□□□ 0.12
PTPRC-206ENST00000413409 EVA1AQ9H8M9 152 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 TIMMDC1Q9NPL8 285 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 RASSF1Q9NS23 344 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 ZNF226Q9NYT6 803 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 ERVK-18Q9QC07 812 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 REV1Q9UBZ9 1251 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 PSORS1C1Q9UIG5 152 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 WDR45Q9Y484 360 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 DCHS2Q6V1P9 2916 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 CCDC88CQ9P219 2028 aa15.8■□□□□ 0.12
PTPRC-206ENST00000413409 SH3D21A4FU49 640 aa15.79■□□□□ 0.12
PTPRC-206ENST00000413409 FITM1A5D6W6 292 aa15.79■□□□□ 0.12
PTPRC-206ENST00000413409 FAM227AF5H4B4 570 aa15.79■□□□□ 0.12
PTPRC-206ENST00000413409 KIAA0513O60268 411 aa15.79■□□□□ 0.12
PTPRC-206ENST00000413409 LDB3O75112 727 aa15.79■□□□□ 0.12
PTPRC-206ENST00000413409 NME6O75414 186 aaPredicted RBP15.79■□□□□ 0.12
PTPRC-206ENST00000413409 IFNA8P32881 189 aa15.79■□□□□ 0.12
PTPRC-206ENST00000413409 PGDP52209 483 aa15.79■□□□□ 0.12
PTPRC-206ENST00000413409 ID2Q02363 134 aa15.79■□□□□ 0.12
PTPRC-206ENST00000413409 DUSP8Q13202 625 aa15.79■□□□□ 0.12
PTPRC-206ENST00000413409 LARS2Q15031 903 aaKnown RBP15.79■□□□□ 0.12
PTPRC-206ENST00000413409 PTGES3Q15185 160 aaKnown RBP15.79■□□□□ 0.12
PTPRC-206ENST00000413409 SLX4IPQ5VYV7 408 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms