RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 TCTN3Q6NUS6 607 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 AQP11Q8NBQ7 271 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 OR9A2Q8NGT5 310 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 OR6S1Q8NH40 331 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 ELP4Q96EB1 424 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 C10orf90Q96M02 699 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 YIPF4Q9BSR8 244 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 SPATA5L1Q9BVQ7 753 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 TTYH1Q9H313 450 aaPredicted RBP12.13□□□□□ -0.47
LITAF-203ENST00000413364 NMNAT1Q9HAN9 279 aaPredicted RBP12.13□□□□□ -0.47
LITAF-203ENST00000413364 SLC2A4RGQ9NR83 387 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 GPR27Q9NS67 375 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 KCMF1Q9P0J7 381 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 ING4Q9UNL4 249 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 FANCMQ8IYD8 2048 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 A0A075B6Q4 140 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 SPTY2D1-AS1A0A0U1RR47 76 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 URADA6NGE7 173 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 RGS10O43665 173 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 SRFP11831 508 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 CD6P30203 668 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 BUD31P41223 144 aaPredicted RBP12.13□□□□□ -0.47
LITAF-203ENST00000413364 MC3RP41968 323 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 FZD2Q14332 565 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 GPR68Q15743 365 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 BAK1Q16611 211 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 PRAMEF8Q5VWM4 474 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 PRAMEF7Q5VXH5 474 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 STX19Q8N4C7 294 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 CAMKVQ8NCB2 501 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 ZNF540Q8NDQ6 660 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 OR4D11Q8NGI4 311 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 ZCCHC10Q8TBK6 192 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 OTUB1Q96FW1 271 aaPredicted RBP12.13□□□□□ -0.47
LITAF-203ENST00000413364 ZFYVE21Q9BQ24 234 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 WSB2Q9NYS7 404 aaPredicted RBP12.13□□□□□ -0.47
LITAF-203ENST00000413364 COPZ2Q9P299 210 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 KIF25Q9UIL4 384 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 KCNK7Q9Y2U2 307 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 XIRP2A4UGR9 3374 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 SZT2Q5T011 3432 aa12.13□□□□□ -0.47
LITAF-203ENST00000413364 A0A0G2JPF8 293 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 TRBV4-1A0A0J9YWV2 114 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 HNRNPCL3B7ZW38 293 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 SEMA7AO75326 666 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 MT-ND2P03891 347 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 RPLP0P05388 317 aaKnown RBP12.12□□□□□ -0.47
LITAF-203ENST00000413364 THEGLP0DJG4 465 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 HNRNPCL4P0DMR1 293 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 CTSKP43235 329 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 MAP2K4P45985 399 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 SMIM11AP58511 58 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 TUSC1Q2TAM9 212 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 FAM76BQ5HYJ3 339 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 DEF8Q6ZN54 512 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 SYT13Q7L8C5 426 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 FRMD1Q8N878 549 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 NUP43Q8NFH3 380 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 SLC37A2Q8TED4 501 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 GTPBP3Q969Y2 492 aaKnown RBP12.12□□□□□ -0.47
LITAF-203ENST00000413364 C16orf58Q96GQ5 468 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 ZNF251Q9BRH9 671 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 PHF7Q9BWX1 381 aaPredicted RBP12.12□□□□□ -0.47
LITAF-203ENST00000413364 GPR174Q9BXC1 333 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 PRDM9Q9NQV7 894 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 BIN3Q9NQY0 253 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 GPN3Q9UHW5 284 aaPredicted RBP12.12□□□□□ -0.47
LITAF-203ENST00000413364 EDARQ9UNE0 448 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 GOLGA4Q13439 2230 aaKnown RBP12.12□□□□□ -0.47
LITAF-203ENST00000413364 LOC105369274A0A096LPK9 316 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 LOC102723532A0A0G2JNH3 316 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 hCG_1807616A0A1W2PRN6 198 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 H7C2Y5 167 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 FAAHO00519 579 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 SIGLEC6O43699 453 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 B3GALT2O43825 422 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 GASTP01350 101 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 IFNA4P05014 189 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 H1F0P07305 194 aaKnown RBP12.12□□□□□ -0.47
LITAF-203ENST00000413364 CELA2BP08218 269 aaPredicted RBP12.12□□□□□ -0.47
LITAF-203ENST00000413364 HPGDP15428 266 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 ZNF10P21506 573 aaPredicted RBP12.12□□□□□ -0.47
LITAF-203ENST00000413364 LSSP48449 732 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 RUNX2Q13950 521 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 DEFB134Q4QY38 66 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 ZNF542PQ5EBM4 170 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 SLC35F1Q5T1Q4 408 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 MLIPQ5VWP3 458 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 ABHD13Q7L211 337 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 OLIG3Q7RTU3 272 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 TAF8Q7Z7C8 310 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 COMTD1Q86VU5 262 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 RBM45Q8IUH3 476 aaKnown RBP12.12□□□□□ -0.47
LITAF-203ENST00000413364 OR4N4Q8N0Y3 316 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 BAHD1Q8TBE0 780 aaPredicted RBP12.12□□□□□ -0.47
LITAF-203ENST00000413364 RSC1A1Q92681 617 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 TCEAL3Q969E4 200 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 OR7D2Q96RA2 312 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 SIGLEC11Q96RL6 698 aa12.12□□□□□ -0.47
LITAF-203ENST00000413364 RHNO1Q9BSD3 238 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms