RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 SENP5Q96HI0 755 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-211ENST00000413186 PCDHGB7Q9Y5F8 929 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 HEMK1Q9Y5R4 338 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-211ENST00000413186 GREB1Q4ZG55 1949 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 GJE1A6NN92 205 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF701M0R085 212 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-211ENST00000413186 HRO43593 1189 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 SLC2A5P22732 501 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 TGFBR2P37173 567 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 COL19A1Q14993 1142 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 AHSA2Q719I0 299 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 PRSS42Q7Z5A4 293 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 RETREG3Q86VR2 466 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 COMTD1Q86VU5 262 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 FUNDC1Q8IVP5 155 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 MISPQ8IVT2 679 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 CACTIN-AS1Q8N1I8 211 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 TMEM151AQ8N4L1 468 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 ANKRD53Q8N9V6 530 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 OR10Q1Q8NGQ4 319 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 SNIP1Q8TAD8 396 aaKnown RBP7.95□□□□□ -1.14
SYNE1-211ENST00000413186 TBC1D15Q8TC07 691 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 OR2A5Q96R48 311 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 TOR3AQ9H497 397 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 SMOC1Q9H4F8 434 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 CCDC86Q9H6F5 360 aaKnown RBP7.95□□□□□ -1.14
SYNE1-211ENST00000413186 CXorf36Q9H7Y0 433 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 MBD1Q9UIS9 605 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-211ENST00000413186 N6AMT1Q9Y5N5 214 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 TSC2P49815 1807 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 FBP2O00757 339 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF195O14628 629 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 PGRMC2O15173 223 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 TNFSF15O95150 251 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 WISP3O95389 354 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-211ENST00000413186 SYNGR4O95473 234 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 MYF5P13349 255 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF28P17035 718 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 EMP3P54852 163 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 RPS3AP61247 264 aaKnown RBP7.95□□□□□ -1.14
SYNE1-211ENST00000413186 ITGADQ13349 1161 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 TLR1Q15399 786 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 CYP27C1Q4G0S4 372 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 MEDAGQ5VYS4 303 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 CES4AQ5XG92 561 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 SLC23A3Q6PIS1 610 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 OGFOD3Q6PK18 319 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 GALNT10Q86SR1 603 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 SLC22A18ASQ8N1D0 253 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 OR5T3Q8NGG3 340 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 OR5D16Q8NGK9 328 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 OR2I1PQ8NGU4 316 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 CLCC1Q96S66 551 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 ADOQ96SZ5 270 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 B3GAT2Q9NPZ5 323 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 ABCB10Q9NRK6 738 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 DCAF13Q9NV06 445 aaKnown RBP7.95□□□□□ -1.14
SYNE1-211ENST00000413186 C19orf53Q9UNZ5 99 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-211ENST00000413186 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 PATE3B3GLJ2 98 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 AIREO43918 545 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 DIRAS1O95057 198 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 PNMTP11086 282 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 GPX2P18283 190 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 TUBG1P23258 451 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 HOXC12P31275 282 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 ARG2P78540 354 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 GAS6Q14393 721 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 SF3B4Q15427 424 aaKnown RBP eCLIP7.95□□□□□ -1.14
SYNE1-211ENST00000413186 PRAMEF8Q5VWM4 474 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 PRAMEF7Q5VXH5 474 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 DHRS13Q6UX07 377 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 USP43Q70EL4 1123 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 DEFB124Q8NES8 71 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 STACQ99469 402 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF717Q9BY31 904 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-211ENST00000413186 DUSP22Q9NRW4 184 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 TVP23BQ9NYZ1 205 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 COQ3Q9NZJ6 369 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 IGHV5-51A0A0C4DH38 117 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 A6NHS1 94 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 D6RAR5 112 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 SLC30A4O14863 429 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 SMAD9O15198 467 aaKnown RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 UBL4AP11441 157 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF823P16415 610 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 GADD45AP24522 165 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 TRHRP34981 398 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 CBX5P45973 191 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 STT3AP46977 705 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 GRK1Q15835 563 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 KLHL26Q53HC5 615 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 LRIF1Q5T3J3 769 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 MORN4Q8NDC4 146 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 HSPBAP1Q96EW2 488 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF354BQ96LW1 612 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 NAA11Q9BSU3 229 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 TWSG1Q9GZX9 223 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 SPNS1Q9H2V7 528 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 FOLH1BQ9HBA9 442 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms