RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 OR10A6Q8NH74 314 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 BBS10Q8TAM1 723 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 WDR60Q8WVS4 1066 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 OIT3Q8WWZ8 545 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 SARAFQ96BY9 339 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 NPAS1Q99742 590 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 UGT2B28Q9BY64 529 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 TMEM38AQ9H6F2 299 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 KAT8Q9H7Z6 458 aaKnown RBP12.65□□□□□ -0.38
CPNE1-206ENST00000412056 MTHFD2LQ9H903 347 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-206ENST00000412056 HHATLQ9HCP6 504 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-206ENST00000412056 GID8Q9NWU2 228 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 ICAM5Q9UMF0 924 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 VDAC3Q9Y277 283 aa12.65□□□□□ -0.38
CPNE1-206ENST00000412056 MRPS18CQ9Y3D5 142 aaKnown RBP12.65□□□□□ -0.38
CPNE1-206ENST00000412056 MPDZO75970 2070 aa12.65□□□□□ -0.39
CPNE1-206ENST00000412056 PCNX1Q96RV3 2341 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 A0A0G2JPF8 293 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 HNRNPCL2B2RXH8 293 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 HNRNPCL3B7ZW38 293 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 SHISA8B8ZZ34 492 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 C5orf58C9J3I9 102 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 PRRG2O14669 202 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 BCKDKO14874 412 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 EIF4E2O60573 245 aaKnown RBP12.64□□□□□ -0.39
CPNE1-206ENST00000412056 HNRNPCL1O60812 293 aaKnown RBP12.64□□□□□ -0.39
CPNE1-206ENST00000412056 SEMA7AO75326 666 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 PGM3O95394 542 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 NPPAP01160 153 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 UBTFL6P0CB48 400 aaPredicted RBP12.64□□□□□ -0.39
CPNE1-206ENST00000412056 HNRNPCL4P0DMR1 293 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 SLC6A2P23975 617 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 ADH7P40394 386 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 CA7P43166 264 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 CPA2P48052 419 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 NUDT2P50583 147 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 GZMMP51124 257 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 CCR4P51679 360 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 ZNF41P51814 821 aaPredicted RBP12.64□□□□□ -0.39
CPNE1-206ENST00000412056 GFRA1P56159 465 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 B3GALT5-AS1P59052 145 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 KCNJ10P78508 379 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 SRSF1Q07955 248 aaKnown RBP eCLIP12.64□□□□□ -0.39
CPNE1-206ENST00000412056 SKP2Q13309 424 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 SCARB2Q14108 478 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 GNA13Q14344 377 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.64□□□□□ -0.39
CPNE1-206ENST00000412056 PLPPR5Q32ZL2 321 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 C4orf17Q53FE4 359 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 EMC4Q5J8M3 183 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 PRAMEF8Q5VWM4 474 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 PRAMEF7Q5VXH5 474 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 RAET1LQ5VY80 246 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 REEP3Q6NUK4 255 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 C3P1Q6ZMU1 363 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 ZNF836Q6ZNA1 936 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 NET1Q7Z628 596 aaPredicted RBP12.64□□□□□ -0.39
CPNE1-206ENST00000412056 DOLPP1Q86YN1 238 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 PEX5LQ8IYB4 626 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 ZZZ3Q8IYH5 903 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 FAM71CQ8NEG0 241 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 OR5M9Q8NGP3 310 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 OR5M1Q8NGP8 315 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 ABTB1Q969K4 478 aaPredicted RBP12.64□□□□□ -0.39
CPNE1-206ENST00000412056 SFXN2Q96NB2 322 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 LRRC37BQ96QE4 947 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 LAT2Q9GZY6 243 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 PIF1Q9H611 641 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 BCL2L10Q9HD36 194 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 PNPLA3Q9NST1 481 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 MED17Q9NVC6 651 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 ARL8BQ9NVJ2 186 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 ACAD8Q9UKU7 415 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 ANGPT4Q9Y264 503 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 SLC35A3Q9Y2D2 325 aa12.64□□□□□ -0.39
CPNE1-206ENST00000412056 SPENQ96T58 3664 aaKnown RBP12.64□□□□□ -0.39
CPNE1-206ENST00000412056 NUDT14O95848 222 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 DBIP07108 87 aaKnown RBP12.63□□□□□ -0.39
CPNE1-206ENST00000412056 NID1P14543 1247 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 IL7RP16871 459 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 AQP1P29972 269 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 GCKP35557 465 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 STARP49675 285 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 CASP6P55212 293 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 SUMO3P55854 103 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-206ENST00000412056 KCNC4Q03721 635 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 TOMM34Q15785 309 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-206ENST00000412056 GXYLT1Q4G148 440 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 LIN52Q52LA3 116 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 NHSL2Q5HYW2 709 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 MRPL2Q5T653 305 aaKnown RBP12.63□□□□□ -0.39
CPNE1-206ENST00000412056 WLSQ5T9L3 541 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 FAM91A1Q658Y4 838 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 VASNQ6EMK4 673 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 NCCRP1Q6ZVX7 275 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-206ENST00000412056 EIF3MQ7L2H7 374 aaKnown RBP12.63□□□□□ -0.39
CPNE1-206ENST00000412056 SERPINA11Q86U17 422 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 FJX1Q86VR8 437 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 CALHM3Q86XJ0 350 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms