RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 MT-ATP6P00846 226 aa2.53□□□□□ -2
PMS1-203ENST00000409593 THRBP10828 461 aa2.53□□□□□ -2
PMS1-203ENST00000409593 APOC4P55056 127 aa2.53□□□□□ -2
PMS1-203ENST00000409593 WASHC5Q12768 1159 aa2.53□□□□□ -2
PMS1-203ENST00000409593 SYPL1Q16563 259 aa2.53□□□□□ -2
PMS1-203ENST00000409593 WASH2PQ6VEQ5 465 aa2.53□□□□□ -2
PMS1-203ENST00000409593 LANCL3Q6ZV70 420 aa2.53□□□□□ -2
PMS1-203ENST00000409593 RNF148Q8N7C7 305 aa2.53□□□□□ -2
PMS1-203ENST00000409593 SUMF2Q8NBJ7 301 aa2.53□□□□□ -2
PMS1-203ENST00000409593 ZNF740Q8NDX6 193 aa2.53□□□□□ -2
PMS1-203ENST00000409593 OR56B1Q8NGI3 324 aa2.53□□□□□ -2
PMS1-203ENST00000409593 CNIH3Q8TBE1 160 aa2.53□□□□□ -2
PMS1-203ENST00000409593 M1APQ8TC57 530 aa2.53□□□□□ -2
PMS1-203ENST00000409593 MS4A14Q96JA4 679 aa2.53□□□□□ -2
PMS1-203ENST00000409593 MBOAT4Q96T53 435 aa2.53□□□□□ -2
PMS1-203ENST00000409593 FEM1AQ9BSK4 669 aa2.53□□□□□ -2
PMS1-203ENST00000409593 PPDPFQ9H3Y8 114 aa2.53□□□□□ -2
PMS1-203ENST00000409593 ROPN1Q9HAT0 212 aaPredicted RBP2.53□□□□□ -2
PMS1-203ENST00000409593 LPAR2Q9HBW0 351 aa2.53□□□□□ -2
PMS1-203ENST00000409593 PRG3Q9Y2Y8 225 aaPredicted RBP2.53□□□□□ -2
PMS1-203ENST00000409593 PLLPQ9Y342 182 aa2.53□□□□□ -2
PMS1-203ENST00000409593 CACNG2Q9Y698 323 aa2.53□□□□□ -2
PMS1-203ENST00000409593 PARD3Q8TEW0 1356 aa2.53□□□□□ -2
PMS1-203ENST00000409593 SSX5O60225 188 aa2.53□□□□□ -2
PMS1-203ENST00000409593 KLF8O95600 359 aaPredicted RBP2.53□□□□□ -2
PMS1-203ENST00000409593 ALPPP05187 535 aa2.53□□□□□ -2
PMS1-203ENST00000409593 ALPPL2P10696 532 aa2.53□□□□□ -2
PMS1-203ENST00000409593 SERPINA2P20848 420 aa2.53□□□□□ -2
PMS1-203ENST00000409593 OAS2P29728 719 aaKnown RBP2.53□□□□□ -2
PMS1-203ENST00000409593 YBEYP58557 167 aaPredicted RBP2.53□□□□□ -2
PMS1-203ENST00000409593 KRTAP10-1P60331 282 aa2.53□□□□□ -2
PMS1-203ENST00000409593 NTHL1P78549 312 aa2.53□□□□□ -2
PMS1-203ENST00000409593 SLC10A7Q0GE19 358 aa2.53□□□□□ -2
PMS1-203ENST00000409593 CHI3L2Q15782 390 aa2.53□□□□□ -2
PMS1-203ENST00000409593 ATF7IP2Q5U623 682 aa2.53□□□□□ -2
PMS1-203ENST00000409593 FAM220AQ7Z4H9 259 aa2.53□□□□□ -2
PMS1-203ENST00000409593 ZNF713Q8N859 430 aaPredicted RBP2.53□□□□□ -2
PMS1-203ENST00000409593 OR52I1Q8NGK6 324 aa2.53□□□□□ -2
PMS1-203ENST00000409593 MYDGFQ969H8 173 aa2.53□□□□□ -2
PMS1-203ENST00000409593 TMEM186Q96B77 213 aa2.53□□□□□ -2
PMS1-203ENST00000409593 TBCDQ9BTW9 1192 aa2.53□□□□□ -2
PMS1-203ENST00000409593 CRNKL1Q9BZJ0 848 aaKnown RBP2.53□□□□□ -2
PMS1-203ENST00000409593 ZDHHC11Q9H8X9 412 aa2.53□□□□□ -2
PMS1-203ENST00000409593 SH2D2AQ9NP31 389 aa2.53□□□□□ -2
PMS1-203ENST00000409593 MMP26Q9NRE1 261 aa2.53□□□□□ -2
PMS1-203ENST00000409593 YAE1D1Q9NRH1 226 aa2.53□□□□□ -2
PMS1-203ENST00000409593 ANO10Q9NW15 660 aa2.53□□□□□ -2
PMS1-203ENST00000409593 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.53□□□□□ -2
PMS1-203ENST00000409593 SCML2Q9UQR0 700 aa2.53□□□□□ -2
PMS1-203ENST00000409593 WSB1Q9Y6I7 421 aa2.53□□□□□ -2
PMS1-203ENST00000409593 ABCC4O15439 1325 aa2.53□□□□□ -2
PMS1-203ENST00000409593 CCDC7Q96M83 1385 aa2.53□□□□□ -2
PMS1-203ENST00000409593 ZNFX1Q9P2E3 1918 aaKnown RBP2.52□□□□□ -2.01
PMS1-203ENST00000409593 TRBV6-6A0A0A6YYG2 114 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 OR6C65A6NJZ3 312 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 ZNF705EA8MWA4 302 aaPredicted RBP2.52□□□□□ -2.01
PMS1-203ENST00000409593 EFNA2O43921 213 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 NPIPB7O75200 414 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 RRASP10301 218 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 CCNCP24863 283 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 CYLC1P35663 651 aaPredicted RBP2.52□□□□□ -2.01
PMS1-203ENST00000409593 CTRLP40313 264 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 RPS10P46783 165 aaKnown RBP2.52□□□□□ -2.01
PMS1-203ENST00000409593 DNAJC21Q5F1R6 531 aaKnown RBP2.52□□□□□ -2.01
PMS1-203ENST00000409593 PAGE3Q5JUK9 113 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 ASPHD2Q6ICH7 369 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 NEK5Q6P3R8 708 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 ARCQ7LC44 396 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 ZNF786Q8N393 782 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 MINDY2Q8NBR6 621 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 NEIL3Q8TAT5 605 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 MGARPQ8TDB4 240 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 PINX1Q96BK5 328 aaKnown RBP2.52□□□□□ -2.01
PMS1-203ENST00000409593 OR5B2Q96R09 309 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 TBX15Q96SF7 602 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 CYP2S1Q96SQ9 504 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 MCHR1Q99705 422 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 ARHGDIGQ99819 225 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 DCDC2Q9UHG0 476 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 ATP6V1HQ9UI12 483 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 CYTH4Q9UIA0 394 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 AP4B1Q9Y6B7 739 aa2.52□□□□□ -2.01
PMS1-203ENST00000409593 INSP01308 110 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 IGHV4-34P06331 123 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 CA3P07451 260 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 HBQ1P09105 142 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 GCFC2P16383 781 aaKnown RBP2.51□□□□□ -2.01
PMS1-203ENST00000409593 ADSSP30520 456 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 HTR1FP30939 366 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 NUDT1P36639 197 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 PPP2R5CQ13362 524 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 UNC119Q13432 240 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 PDK1Q15118 436 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 NSDHLQ15738 373 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 RNF165Q6ZSG1 346 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 NRMQ8IXM6 262 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 KDM8Q8N371 416 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 CERS5Q8N5B7 392 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 GIPC3Q8TF64 312 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms