RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 WIPF3A6NGB9 483 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 BCAS1O75363 584 aaPredicted RBP17.28■□□□□ 0.36
PPM1B-207ENST00000409486 SNRPB2P08579 225 aaKnown RBP17.28■□□□□ 0.36
PPM1B-207ENST00000409486 ZCCHC18P0CG32 403 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 GABRA1P14867 456 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 RYKP34925 604 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 LHX2P50458 406 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 GNGT1P63211 74 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 NFYCQ13952 458 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 CAPRIN1Q14444 709 aaKnown RBP17.28■□□□□ 0.36
PPM1B-207ENST00000409486 TOMM34Q15785 309 aaPredicted RBP17.28■□□□□ 0.36
PPM1B-207ENST00000409486 DHDDSQ86SQ9 333 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 MSRB3Q8IXL7 192 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 ZNF808Q8N4W9 903 aaPredicted RBP17.28■□□□□ 0.36
PPM1B-207ENST00000409486 CA5BP1Q8WTZ4 195 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 RNF145Q96MT1 663 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 ZNF317Q96PQ6 595 aaPredicted RBP17.28■□□□□ 0.36
PPM1B-207ENST00000409486 PIGQQ9BRB3 760 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 NMUR2Q9GZQ4 415 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 RUBCNLQ9H714 662 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 SLC52A3Q9NQ40 469 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 ARMCX1Q9P291 453 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 KLHL14Q9P2G3 628 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 L3MBTL1Q9Y468 752 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 PCNX1Q96RV3 2341 aa17.28■□□□□ 0.36
PPM1B-207ENST00000409486 UTP20O75691 2785 aaKnown RBP17.27■□□□□ 0.36
PPM1B-207ENST00000409486 TMEM247A6NEH6 219 aa17.27■□□□□ 0.36
PPM1B-207ENST00000409486 NPIPB9F8W1W9 429 aa17.27■□□□□ 0.36
PPM1B-207ENST00000409486 ZNF264O43296 627 aa17.27■□□□□ 0.36
PPM1B-207ENST00000409486 AGFG1P52594 562 aaKnown RBP17.27■□□□□ 0.36
PPM1B-207ENST00000409486 MVDP53602 400 aa17.27■□□□□ 0.36
PPM1B-207ENST00000409486 FOXF1Q12946 379 aa17.27■□□□□ 0.36
PPM1B-207ENST00000409486 NHSL2Q5HYW2 709 aa17.27■□□□□ 0.36
PPM1B-207ENST00000409486 CHMP1BQ7LBR1 199 aa17.27■□□□□ 0.36
PPM1B-207ENST00000409486 MAMDC2Q7Z304 686 aaPredicted RBP17.27■□□□□ 0.36
PPM1B-207ENST00000409486 C10orf82Q8WW14 230 aa17.27■□□□□ 0.36
PPM1B-207ENST00000409486 TMEM19Q96HH6 336 aa17.27■□□□□ 0.36
PPM1B-207ENST00000409486 TRNT1Q96Q11 434 aaKnown RBP17.27■□□□□ 0.36
PPM1B-207ENST00000409486 THUMPD3Q9BV44 507 aaKnown RBP17.27■□□□□ 0.36
PPM1B-207ENST00000409486 UCK2Q9BZX2 261 aa17.27■□□□□ 0.36
PPM1B-207ENST00000409486 PRDM14Q9GZV8 571 aa17.27■□□□□ 0.36
PPM1B-207ENST00000409486 LIPT1Q9Y234 373 aa17.27■□□□□ 0.36
PPM1B-207ENST00000409486 ICE1Q9Y2F5 2266 aa17.27■□□□□ 0.35
PPM1B-207ENST00000409486 LRRK2Q5S007 2527 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 IGLV3-32A0A0A0MS00 114 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 A0A0G2JNJ9 132 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 NKX2-6A6NCS4 301 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 C5orf58C9J3I9 102 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 MSX1P28360 303 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 ADH7P40394 386 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 P2RX1P51575 399 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 KLF10Q13118 480 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 RGNQ15493 299 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 ZNF141Q15928 474 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 PLPPR5Q32ZL2 321 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 MMEL1Q495T6 779 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 METTL21CQ5VZV1 264 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 EIF3MQ7L2H7 374 aaKnown RBP17.26■□□□□ 0.35
PPM1B-207ENST00000409486 MTERF4Q7Z6M4 381 aaKnown RBP17.26■□□□□ 0.35
PPM1B-207ENST00000409486 RETREG3Q86VR2 466 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 TNIP2Q8NFZ5 429 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 PHF10Q8WUB8 498 aaKnown RBP17.26■□□□□ 0.35
PPM1B-207ENST00000409486 STON2Q8WXE9 905 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 SLC38A1Q9H2H9 487 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 SAR1AQ9NR31 198 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 Q9UFV3 132 aa17.26■□□□□ 0.35
PPM1B-207ENST00000409486 LOC100653049A0A140TA62 436 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 CLCA1A8K7I4 914 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 AHRRA9YTQ3 701 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 EIF1AYO14602 144 aaKnown RBP17.25■□□□□ 0.35
PPM1B-207ENST00000409486 KRT34O76011 436 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 IL11P20809 199 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 CHMP24386 653 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 GRNP28799 593 aaKnown RBP17.25■□□□□ 0.35
PPM1B-207ENST00000409486 SFTPDP35247 375 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 CLDN18P56856 261 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 CLDN20P56880 219 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 MTPNP58546 118 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 IRX1P78414 480 aaPredicted RBP17.25■□□□□ 0.35
PPM1B-207ENST00000409486 GCNT6Q5T4J0 391 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 P4HA3Q7Z4N8 544 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 SNX32Q86XE0 403 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 VRK2Q86Y07 508 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 C10orf111Q8N326 155 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 MEIOBQ8N635 442 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 TOR1AIP2Q8NFQ8 470 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 FBXO27Q8NI29 283 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 NFKBIDQ8NI38 313 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 SLC38A5Q8WUX1 472 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 WDR60Q8WVS4 1066 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 RAD21L1Q9H4I0 556 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 IKZF5Q9H5V7 419 aa17.25■□□□□ 0.35
PPM1B-207ENST00000409486 CACYBPQ9HB71 228 aaKnown RBP17.25■□□□□ 0.35
PPM1B-207ENST00000409486 NCOA6Q14686 2063 aaPredicted RBP17.25■□□□□ 0.35
PPM1B-207ENST00000409486 CLDN14O95500 239 aa17.24■□□□□ 0.35
PPM1B-207ENST00000409486 IL7RP16871 459 aa17.24■□□□□ 0.35
PPM1B-207ENST00000409486 HOXB9P17482 250 aaPredicted RBP17.24■□□□□ 0.35
PPM1B-207ENST00000409486 HTR1EP28566 365 aa17.24■□□□□ 0.35
PPM1B-207ENST00000409486 SUCLG1P53597 346 aaKnown RBP17.24■□□□□ 0.35
PPM1B-207ENST00000409486 SELPLGQ14242 412 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms