RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 INPP5KQ9BT40 448 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ITPAQ9BY32 194 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 IL21Q9HBE4 155 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 AMBNQ9NP70 447 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 LRFN1Q9P244 771 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ABCD2Q9UBJ2 740 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 MALT1Q9UDY8 824 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 TBC1D24Q9ULP9 559 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 LHX6Q9UPM6 363 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ZNF850A8MQ14 1090 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ZNF814B7Z6K7 855 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 CYB5BO43169 146 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 FRKP42685 505 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 SRSF5Q13243 272 aaKnown RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 OR8B8Q15620 311 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 AWAT2Q6E213 333 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 LRRN1Q6UXK5 716 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 MED25Q71SY5 747 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 TECPR1Q7Z6L1 1165 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 DND1Q8IYX4 353 aaKnown RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 HS3ST5Q8IZT8 346 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 LMNTD1Q8N9Z9 388 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 TMEM239Q8WW34 195 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 FAM46BQ96A09 425 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 APH1AQ96BI3 265 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ATG5Q9H1Y0 275 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 MAGIXQ9H6Y5 334 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 LIN28AQ9H9Z2 209 aaKnown RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 LYRM4Q9HD34 91 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 MED11Q9P086 117 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 OAZ3Q9UMX2 235 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 KAT6AQ92794 2004 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 PIAS2O75928 621 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 PRKACGP22612 351 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 HTR1EP28566 365 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 IMPA1P29218 277 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 KDELR2P33947 212 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 HTR5AP47898 357 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 UCNP55089 124 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 NKX3-2P78367 333 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 POU3F1Q03052 451 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 LAPTM4AQ15012 233 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ESCO2Q56NI9 601 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 PERM1Q5SV97 790 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 BLOC1S3Q6QNY0 202 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 MOB3CQ70IA8 216 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 WFDC8Q8IUA0 241 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 NAGSQ8N159 534 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 COQ10AQ96MF6 247 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 RPP25Q9BUL9 199 aaKnown RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 HES7Q9BYE0 225 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 RHBDL2Q9NX52 303 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ZNF175Q9Y473 711 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 DNAJC15Q9Y5T4 150 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 MYH4Q9Y623 1939 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 C2orf72A6NCS6 295 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 LMO7DNF2Z398 122 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 JRKO75564 520 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 OR7A10O76100 309 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 RPS17P08708 135 aaKnown RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 PEX2P28328 305 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 PTGER1P34995 402 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 LIM2P55344 173 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 S100A10P60903 97 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 PTPRRQ15256 657 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 CCNJQ5T5M9 372 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 TMEM211Q6ICI0 200 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 GUSBP11Q6P575 273 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 FRMD1Q8N878 549 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 NETO1Q8TDF5 533 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ZNF566Q969W8 418 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ZNF707Q96C28 371 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 KLHL15Q96M94 604 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 C1QTNF2Q9BXJ5 285 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ACPTQ9BZG2 426 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 EGLN1Q9GZT9 426 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 IL20RAQ9UHF4 553 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 DDX60LQ5H9U9 1706 aaKnown RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 SERINC4A6NH21 518 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 GPR171O14626 319 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 SLCO2B1O94956 709 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 CNOT4O95628 575 aaKnown RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 MT-ND2P03891 347 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 EPHA8P29322 1005 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ADH7P40394 386 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 TSFMP43897 325 aaKnown RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ELAVL1Q15717 326 aaKnown RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 IGFN1Q86VF2 1251 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 MORN4Q8NDC4 146 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 UBTD2Q8WUN7 234 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 MAL2Q969L2 176 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 FAM71F1Q96KD3 344 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 MED18Q9BUE0 208 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ELOVL3Q9HB03 270 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 SMOXQ9NWM0 555 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 FAM118AQ9NWS6 357 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 PPP1R14DQ9NXH3 145 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 MAGED1Q9Y5V3 778 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 LOC100509620A0A075B734 347 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms