RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 NPAS1Q99742 590 aa9.32□□□□□ -0.92
TSPAN9-202ENST00000407263 CPPED1Q9BRF8 314 aaPredicted RBP9.32□□□□□ -0.92
TSPAN9-202ENST00000407263 SLC39A3Q9BRY0 314 aa9.32□□□□□ -0.92
TSPAN9-202ENST00000407263 HOXD1Q9GZZ0 328 aa9.32□□□□□ -0.92
TSPAN9-202ENST00000407263 SLC38A1Q9H2H9 487 aa9.32□□□□□ -0.92
TSPAN9-202ENST00000407263 SAR1AQ9NR31 198 aa9.32□□□□□ -0.92
TSPAN9-202ENST00000407263 NDUFAF1Q9Y375 327 aa9.32□□□□□ -0.92
TSPAN9-202ENST00000407263 DTNAQ9Y4J8 743 aa9.32□□□□□ -0.92
TSPAN9-202ENST00000407263 FAM215AQ9Y5M1 114 aa9.32□□□□□ -0.92
TSPAN9-202ENST00000407263 CAPN7Q9Y6W3 813 aa9.32□□□□□ -0.92
TSPAN9-202ENST00000407263 TRBV5-3A0A0A0MS03 114 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 OR2M5A3KFT3 312 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 SERINC4A6NH21 518 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 CLDN24A6NM45 220 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 FAM47E-STBD1D6RA91 191 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 H3BNH8 94 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 GTPBP1O00178 669 aaKnown RBP9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 FBP2O00757 339 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 WDR1O75083 606 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 BCAS1O75363 584 aaPredicted RBP9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 SOX30O94993 753 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 CSTAP01040 98 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 DRD4P21917 467 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 GFRA1P56159 465 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 NUP107P57740 925 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 B3GALT5-AS1P59052 145 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 SELPLGQ14242 412 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 FGFBP1Q14512 234 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 RGNQ15493 299 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 MAPK11Q15759 364 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 ZNF141Q15928 474 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 PLPPR5Q32ZL2 321 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 ACSF3Q4G176 576 aaPredicted RBP9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 KLHL26Q53HC5 615 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 GCNT6Q5T4J0 391 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 C1QTNF12Q5T7M4 302 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 VASNQ6EMK4 673 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 RTL6Q6ICC9 239 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 AAGABQ6PD74 315 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 RPTNQ6XPR3 784 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 ULK2Q8IYT8 1036 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 EID3Q8N140 333 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 POU5F2Q8N7G0 328 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 WDR60Q8WVS4 1066 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 ITLN2Q8WWU7 325 aaPredicted RBP9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 RNF145Q96MT1 663 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 DMRTA2Q96SC8 542 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 TIMP4Q99727 224 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 PRDM14Q9GZV8 571 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 RAD21L1Q9H4I0 556 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 TMEM185BQ9H7F4 350 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 MED17Q9NVC6 651 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 TMEM45AQ9NWC5 275 aa9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 SPTBN1Q01082 2364 aaKnown RBP9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 SPTAN1Q13813 2472 aaKnown RBP9.31□□□□□ -0.92
TSPAN9-202ENST00000407263 DOPEY1Q5JWR5 2465 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 TMEM247A6NEH6 219 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 FAM90A27PA6NNH2 459 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 E9PLN8 166 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 MRASO14807 208 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 ZNF264O43296 627 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 ZIC3O60481 467 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 ACTL6AO96019 429 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 LHX2P50458 406 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 P2RX1P51575 399 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 CRISP3P54108 245 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 CLDN18P56856 261 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 TXNL4AP83876 142 aaKnown RBP9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 PLAURQ03405 335 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 FADDQ13158 208 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 SKP2Q13309 424 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 CDSNQ15517 529 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 MAPRE2Q15555 327 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 TOMM34Q15785 309 aaPredicted RBP9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 MMEL1Q495T6 779 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 NHSL2Q5HYW2 709 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 HIST2H2BCQ6DN03 193 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 PPP4R4Q6NUP7 873 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 ENPP6Q6UWR7 440 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 DLEU7Q6UYE1 221 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 B3GNT6Q6ZMB0 384 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 ZNF836Q6ZNA1 936 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 LRRC74BQ6ZQY2 392 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 CPLX4Q7Z7G2 160 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 MRGPRGQ86SM5 289 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 VRK2Q86Y07 508 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 ANKRD13BQ86YJ7 626 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 NFKBIDQ8NI38 313 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 SLC38A5Q8WUX1 472 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 SDCCAG3Q96C92 435 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 ZG16BQ96DA0 208 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 WDYHV1Q96HA8 205 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 TRNT1Q96Q11 434 aaKnown RBP9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 TRIB1Q96RU8 372 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 VKORC1Q9BQB6 163 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 TUBA1CQ9BQE3 449 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 POLE3Q9NRF9 147 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 ICAM5Q9UMF0 924 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 LIPT1Q9Y234 373 aa9.3□□□□□ -0.92
TSPAN9-202ENST00000407263 DSPPQ9NZW4 1301 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms