RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 IGFBP1P08833 259 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 H2BFMP0C1H6 154 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 MMP11P24347 488 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 S100A5P33763 92 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 P2RY1P47900 373 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 NOVA1P51513 510 aaKnown RBP3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 RIDAP52758 137 aaKnown RBP3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 AP3M2P53677 418 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 RGS1Q08116 209 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 C1orf61Q13536 156 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 DPYSL3Q14195 570 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 MXD4Q14582 209 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 SLC5A12Q1EHB4 618 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 C17orf58Q2M2W7 97 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 SNAI3Q3KNW1 292 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 MS4A13Q5J8X5 152 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 FAM120AOSQ5T036 256 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 RFWD3Q6PCD5 774 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 METAP1DQ6UB28 335 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 ZNF497Q6ZNH5 498 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 TRPM8Q7Z2W7 1104 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 LINC01561Q8N1V8 128 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 BPIFB2Q8N4F0 458 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 ZSCAN4Q8NAM6 433 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 BEST4Q8NFU0 473 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 STXBP6Q8NFX7 210 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 ACMSDQ8TDX5 336 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 TBCKQ8TEA7 893 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 CRYGNQ8WXF5 182 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 DUSP16Q9BY84 665 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 PARD6BQ9BYG5 372 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 FGFBP2Q9BYJ0 223 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 SGK2Q9HBY8 427 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 SIGLEC8Q9NYZ4 499 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 ONECUT1Q9UBC0 465 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 LCMT1Q9UIC8 334 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 TRAF3IP3Q9Y228 551 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 POLDIP2Q9Y2S7 368 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 AUP1Q9Y679 476 aa3.96□□□□□ -1.78
HMGB1P13-201ENST00000406019 IGLV7-46A0A075B6I9 117 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 IGHV3OR16-12A0A075B7B8 117 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 A0A1B0GU03 582 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 FAM47DPA6NHR8 397 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 SNTNA6NMZ2 147 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 FOXI3A8MTJ6 420 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 SOCS3O14543 225 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 POLR3GO15318 223 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 MSH4O15457 936 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 TAPBPO15533 448 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 RNF113AO15541 343 aaKnown RBP3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 IDH3BO43837 385 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 TRIM3O75382 744 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 ERLIN1O75477 346 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 SCGNO76038 276 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 RPSAP08865 295 aaKnown RBP3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 SNRPCP09234 159 aaKnown RBP3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 UQCRFS1P1P0C7P4 283 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 PNMTP11086 282 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 UGT1A4P22310 534 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 SPRP35270 261 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 GSK3BP49841 420 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 ATP4BP51164 291 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 PLTPP55058 493 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 RPL8P62917 257 aaKnown RBP3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 GSTO1P78417 241 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 BDH1Q02338 343 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 RIPPLY1Q0D2K3 151 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 CCDC173Q0VFZ6 552 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 RCN1Q15293 331 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 SYCP1Q15431 976 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 KRT71Q3SY84 523 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 SFT2D3Q587I9 215 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 FAM182AQ5T1J6 154 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 PVRIGQ6DKI7 326 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 OR4F3Q6IEY1 312 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 SCYL2Q6P3W7 929 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 FAM173BQ6P4H8 233 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 MOB3BQ86TA1 216 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 Q8NBF4 154 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 BBOF1Q8ND07 529 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 OR10A7Q8NGE5 316 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 CNIH3Q8TBE1 160 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 SDSLQ96GA7 329 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 ART5Q96L15 291 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 OSBPL10Q9BXB5 764 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 GPR61Q9BZJ8 451 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 PKIBQ9C010 78 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 UPF3AQ9H1J1 476 aaKnown RBP3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 LRRN3Q9H3W5 708 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 EHD1Q9H4M9 534 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 IKZF5Q9H5V7 419 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 ABCC13Q9NSE7 274 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 ETNK2Q9NVF9 386 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 PIGLQ9Y2B2 252 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 CPQQ9Y646 472 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 EVC2Q86UK5 1308 aa3.95□□□□□ -1.78
HMGB1P13-201ENST00000406019 NOTCH3Q9UM47 2321 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 SMARCA2P51531 1590 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 IGHV3-16A0A0C4DH30 117 aa3.94□□□□□ -1.78
HMGB1P13-201ENST00000406019 EPM2AB3EWF7 344 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms