RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 ACP2P11117 423 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 NR0B1P51843 470 aaKnown RBP15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 GK2Q14410 553 aaPredicted RBP15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 SLBPQ14493 270 aaKnown RBP eCLIP15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 IER5LQ5T953 404 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 BICRALQ6AI39 1079 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 CD300LDQ6UXZ3 194 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 Q6ZNB5 142 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 TMEM173Q86WV6 379 aaPredicted RBP15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 KLBQ86Z14 1044 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 HORMAD2Q8N7B1 307 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 VOPP1Q96AW1 172 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 TMEM19Q96HH6 336 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 CXorf36Q9H7Y0 433 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 MARK1Q9P0L2 795 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 TRDV1A0A1B0GX56 115 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 MAPK9P45984 424 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 POU4F2Q12837 409 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 KIAA1211LQ6NV74 962 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 TNFAIP8L2Q6P589 184 aaPredicted RBP15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 CD200R1LQ6Q8B3 271 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 SCAMP4Q969E2 229 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 CREB3L1Q96BA8 519 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 TIFAQ96CG3 184 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 SLC38A2Q96QD8 506 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 ATF6BQ99941 703 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 METTL9Q9H1A3 318 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 ELAC1Q9H777 363 aaKnown RBP15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 EMC7Q9NPA0 242 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 EXOSC1Q9Y3B2 195 aaKnown RBP15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 DYRK1BQ9Y463 629 aa15.14■□□□□ 0.01
COL4A3BP-204ENST00000405807 LOC102723532A0A0G2JNH3 316 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 UBE2CO00762 179 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 PHYHO14832 338 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 KLHL18O94889 574 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 IL3P08700 152 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 ANXA3P12429 323 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 OPRD1P41143 372 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 CCR9P51686 369 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 KIAA1024LP59773 190 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 MC2RQ01718 297 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 ECH1Q13011 328 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 LRRC73Q5JTD7 316 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 FAM109BQ6ICB4 259 aaPredicted RBP15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 TCEAL6Q6IPX3 200 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 RBM45Q8IUH3 476 aaKnown RBP15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 ZNF454Q8N9F8 522 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 MRPL38Q96DV4 380 aaKnown RBP15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 NEURL3Q96EH8 262 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 CAMK1GQ96NX5 476 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 SLC22A12Q96S37 553 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 FUZQ9BT04 418 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 ZDHHC6Q9H6R6 413 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 CLEC4EQ9ULY5 219 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 WASF3Q9UPY6 502 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 CDH10Q9Y6N8 788 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 ISM1B1AKI9 464 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 NPC1O15118 1278 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 C1GALT1C1LP0DN25 315 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 CD70P32970 193 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 RPS26P62854 115 aaKnown RBP15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 SMCO1Q147U7 214 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 ZNF57Q68EA5 555 aaPredicted RBP15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 ACSM5Q6NUN0 579 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 PODNL1Q6PEZ8 512 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 C3P1Q6ZMU1 363 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 LINC00471Q8N535 108 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 RNFT2Q96EX2 444 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 ZNF607Q96SK3 696 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 TAAR2Q9P1P5 351 aa15.13■□□□□ 0.01
COL4A3BP-204ENST00000405807 C5orf52A6NGY3 159 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 WASH3PC4AMC7 463 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 TSPAN6O43657 245 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 SOX30O94993 753 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 ADRB3P13945 408 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 NPPBP16860 134 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 CTSCP53634 463 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 GAS1P54826 345 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 POLR2LP62875 67 aaKnown RBP15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 EFNB1P98172 346 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 CDK5Q00535 292 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 ILF3Q12906 894 aaKnown RBP eCLIP15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 TSTA3Q13630 321 aaPredicted RBP15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 TMEM31Q5JXX7 168 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 REC114Q7Z4M0 266 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 ZNF227Q86WZ6 799 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 NUDT13Q86X67 352 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 CBLN2Q8IUK8 224 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 OR11H7Q8NGC8 314 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 WDR34Q96EX3 536 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 MISP3Q96FF7 219 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 ARHGAP9Q9BRR9 750 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 TGIF2Q9GZN2 237 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 FOLH1BQ9HBA9 442 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 MED11Q9P086 117 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 CLCA2Q9UQC9 943 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 NCKAP1Q9Y2A7 1128 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 PRODHO43272 600 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 LRRTM2O43300 516 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms