RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TFPIP10646 304 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 CD53P19397 219 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 F8A1P23610 371 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 NUDT1P36639 197 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 PITPNBP48739 271 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 ENPP2Q13822 863 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 C18orf63Q68DL7 685 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 SIGIRRQ6IA17 410 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 CDC73Q6P1J9 531 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 NIPAL3Q6P499 406 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 GANCQ8TET4 914 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 GIMAP5Q96F15 307 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 AHCYL2Q96HN2 611 aaKnown RBP18.44■□□□□ 0.54
CCDC47-202ENST00000403162 FERD3LQ96RJ6 166 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 ALG8Q9BVK2 526 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 ACTRT3Q9BYD9 372 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 KRCC1Q9NPI7 259 aaPredicted RBP18.44■□□□□ 0.54
CCDC47-202ENST00000403162 B3GNT2Q9NY97 397 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 CA14Q9ULX7 337 aa18.44■□□□□ 0.54
CCDC47-202ENST00000403162 CDC42EP2O14613 210 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 NOS1APO75052 506 aaPredicted RBP18.43■□□□□ 0.54
CCDC47-202ENST00000403162 PCCBP05166 539 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 NPR2P20594 1047 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 PAICSP22234 425 aaKnown RBP18.43■□□□□ 0.54
CCDC47-202ENST00000403162 BTCP35070 178 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 RAB28P51157 221 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 MLF2Q15773 248 aaPredicted RBP18.43■□□□□ 0.54
CCDC47-202ENST00000403162 SDE2Q6IQ49 451 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 HEPHL1Q6MZM0 1159 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 OR2L5Q8NG80 312 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 OR9A2Q8NGT5 310 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 BRIX1Q8TDN6 353 aaKnown RBP18.43■□□□□ 0.54
CCDC47-202ENST00000403162 ABCG5Q9H222 651 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 TRIM36Q9NQ86 728 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 IL20RAQ9UHF4 553 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 SLC23A1Q9UHI7 598 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 COL6A3P12111 3177 aa18.43■□□□□ 0.54
CCDC47-202ENST00000403162 FAM183AA6NL82 134 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 SHISA7A6NL88 538 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 FABP7O15540 132 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 RFPL3O75679 317 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 KLF8O95600 359 aaPredicted RBP18.42■□□□□ 0.54
CCDC47-202ENST00000403162 DHFRP00374 187 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 AHCYP23526 432 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 NTSR1P30989 418 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 ACSL1P33121 698 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 P2RY2P41231 377 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 PDX1P52945 283 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 FAM205BPQ63HN1 556 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 ASB18Q6ZVZ8 466 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 MEPCEQ7L2J0 689 aaKnown RBP18.42■□□□□ 0.54
CCDC47-202ENST00000403162 SCMH1Q96GD3 660 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 ZNF681Q96N22 645 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 MACROD1Q9BQ69 325 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.42■□□□□ 0.54
CCDC47-202ENST00000403162 MED28Q9H204 178 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 ZNF443Q9Y2A4 671 aaPredicted RBP18.42■□□□□ 0.54
CCDC47-202ENST00000403162 GPSM3Q9Y4H4 160 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 CACNG2Q9Y698 323 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 NUMA1Q14980 2115 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 AHRP35869 848 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 FCN2Q15485 313 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 TRAM1Q15629 374 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 ESCO2Q56NI9 601 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 PLBD1Q6P4A8 553 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 TPRA1Q86W33 373 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 ELMOD2Q8IZ81 293 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 TMEM99Q8N816 258 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 SAMD12Q8N8I0 201 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 OR2L8Q8NGY9 312 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 C12orf66Q96MD2 445 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 GPR137Q96N19 417 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 INSM2Q96T92 566 aaPredicted RBP18.42■□□□□ 0.54
CCDC47-202ENST00000403162 XKR8Q9H6D3 395 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 MRPS30Q9NP92 439 aaKnown RBP18.42■□□□□ 0.54
CCDC47-202ENST00000403162 EMC7Q9NPA0 242 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 TEKT2Q9UIF3 430 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 ATG2BQ96BY7 2078 aa18.42■□□□□ 0.54
CCDC47-202ENST00000403162 FCMRO60667 390 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 ZGLP1P0C6A0 271 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 CERS1P27544 350 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 SHC1P29353 583 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 TSFMP43897 325 aaKnown RBP18.41■□□□□ 0.54
CCDC47-202ENST00000403162 GALEQ14376 348 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 BCL2L15Q5TBC7 163 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 ZBTB37Q5TC79 503 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 SFXN4Q6P4A7 337 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 FRRS1Q6ZNA5 592 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 RFPL4BQ6ZWI9 263 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 CCDC28AQ8IWP9 274 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 LRRC17Q8N6Y2 441 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 SUN5Q8TC36 379 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 RAB7BQ96AH8 199 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 SLC35A4Q96G79 324 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 RAB11FIP5Q9BXF6 653 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 C1QTNF2Q9BXJ5 285 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 HDAC8Q9BY41 377 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 PPIL3Q9H2H8 161 aaKnown RBP18.41■□□□□ 0.54
CCDC47-202ENST00000403162 GHITMQ9H3K2 345 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 SLC6A20Q9NP91 592 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms