RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 GDPD1Q8N9F7 314 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 ASB12Q8WXK4 309 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 TBC1D20Q96BZ9 403 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 TMEM246Q9BRR3 403 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 SAGE1Q9NXZ1 904 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 NUMA1Q14980 2115 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 hCG_1807616A0A1W2PRN6 198 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 DCDC2BA2VCK2 349 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 TVP23AA6NH52 213 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 AMY2AP04746 511 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 CHRNEQ04844 493 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 AIMP2Q13155 320 aaKnown RBP17.05■□□□□ 0.32
COL18A1-204ENST00000400337 EFR3AQ14156 821 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 KIAA0895LQ68EN5 471 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 LILRA3Q8N6C8 439 aaPredicted RBP17.05■□□□□ 0.32
COL18A1-204ENST00000400337 L3MBTL4Q8NA19 623 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 ADAM29Q9UKF5 820 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 TAF1P21675 1872 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 CPNE6O95741 557 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 HMGA1P17096 107 aaKnown RBP17.05■□□□□ 0.32
COL18A1-204ENST00000400337 UBE2NP61088 152 aaKnown RBP17.05■□□□□ 0.32
COL18A1-204ENST00000400337 GLO1Q04760 184 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 LEXMQ3ZCV2 418 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 ADAMTS19Q8TE59 1207 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 FAM71F1Q96KD3 344 aaPredicted RBP17.05■□□□□ 0.32
COL18A1-204ENST00000400337 ZNF583Q96ND8 569 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 TMEM121BQ9BXQ6 578 aaPredicted RBP17.05■□□□□ 0.32
COL18A1-204ENST00000400337 TEX10Q9NXF1 929 aaPredicted RBP17.05■□□□□ 0.32
COL18A1-204ENST00000400337 UGT2B7P16662 529 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 THBS2P35442 1172 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 CNIH2Q6PI25 160 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 PGAP2Q9UHJ9 254 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 ICKQ9UPZ9 632 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 DAP3P51398 398 aaKnown RBP17.05■□□□□ 0.32
COL18A1-204ENST00000400337 KCNJ10P78508 379 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 GNMTQ14749 295 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 SMN1Q16637 294 aaKnown RBP17.05■□□□□ 0.32
COL18A1-204ENST00000400337 BOLLQ8N9W6 283 aaKnown RBP17.05■□□□□ 0.32
COL18A1-204ENST00000400337 NPRL2Q8WTW4 380 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 POU2F3Q9UKI9 436 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 SLX4Q8IY92 1834 aa17.05■□□□□ 0.32
COL18A1-204ENST00000400337 LINC01553A4QN01 128 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 A6NIZ1 184 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 OPN1LWP04000 364 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 ZNF28P17035 718 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 CRHBPP24387 322 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 PBX2P40425 430 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 SLC26A5P58743 744 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 ACTBP60709 375 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 RAP1BP61224 184 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 RAP1AP62834 184 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 ACTG1P63261 375 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 OR5M10Q6IEU7 315 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 Q6ZPB1 254 aaPredicted RBP17.04■□□□□ 0.32
COL18A1-204ENST00000400337 BEST3Q8N1M1 668 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 GPR148Q8TDV2 347 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 HHIPL1Q96JK4 782 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 FOLH1BQ9HBA9 442 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 TAS2R8Q9NYW2 309 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 UBQLN2Q9UHD9 624 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 SULT2B1O00204 365 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 LSSP48449 732 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 MAT1AQ00266 395 aaKnown RBP17.04■□□□□ 0.32
COL18A1-204ENST00000400337 ECH1Q13011 328 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 LMF2Q9BU23 707 aaKnown RBP17.04■□□□□ 0.32
COL18A1-204ENST00000400337 ARL6Q9H0F7 186 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 MEGF11A6BM72 1044 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 FTCDNL1E5RQL4 147 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 F5H5K5 113 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 CXCR4P61073 352 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 YPEL5P62699 121 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 FOXK1P85037 733 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 COL28A1Q2UY09 1125 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 RSPO2Q6UXX9 243 aaPredicted RBP17.04■□□□□ 0.32
COL18A1-204ENST00000400337 TRIM46Q7Z4K8 759 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 SLC25A18Q9H1K4 315 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 HIF3AQ9Y2N7 669 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 AGAP5A6NIR3 686 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 DIRAS3O95661 229 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 PTTG1O95997 202 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 LCATP04180 440 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 HRGP04196 525 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 MYOGP15173 224 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 ITGB8P26012 769 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 SQSTM1Q13501 440 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 PGGHGQ32M88 737 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 C16orf58Q96GQ5 468 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 MYADMQ96S97 322 aa17.04■□□□□ 0.32
COL18A1-204ENST00000400337 ALPLP05186 524 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 S100A2P29034 98 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 FAM83HQ6ZRV2 1179 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-204ENST00000400337 TMEM163Q8TC26 289 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 QRSL1Q9H0R6 528 aaKnown RBP17.03■□□□□ 0.32
COL18A1-204ENST00000400337 INIPQ9NRY2 104 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 CUTCQ9NTM9 273 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 EEF1E1-BLOC1S5C9J1V9 151 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 YY2O15391 372 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 LYRM1O43325 122 aa17.03■□□□□ 0.32
COL18A1-204ENST00000400337 CD40LGP29965 261 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms