RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 FAIM2Q9BWQ8 316 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 UBQLN3Q9H347 655 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 LIN7BQ9HAP6 207 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 MED17Q9NVC6 651 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 COPZ2Q9P299 210 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 IL36AQ9UHA7 158 aa13.03□□□□□ -0.32
APOB-202ENST00000399256 LAMA3Q16787 3333 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 hCG_1807616A0A1W2PRN6 198 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 TRABD2BA6NFA1 517 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 LRRN3E7EW58 273 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 KHNYNO15037 678 aaKnown RBP13.02□□□□□ -0.32
APOB-202ENST00000399256 BET1O15155 118 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 RGS11O94810 467 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 ALDOBP05062 364 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 GNA13Q14344 377 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 C6orf132Q5T0Z8 1188 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 ARSKQ6UWY0 536 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 GDF7Q7Z4P5 450 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 GCDHQ92947 438 aaPredicted RBP13.02□□□□□ -0.32
APOB-202ENST00000399256 RAD51AP1Q96B01 352 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 TOE1Q96GM8 510 aaKnown RBP13.02□□□□□ -0.32
APOB-202ENST00000399256 SLC38A1Q9H2H9 487 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 LRRN3Q9H3W5 708 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 BRD7Q9NPI1 651 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 ENTPD4Q9Y227 616 aa13.02□□□□□ -0.32
APOB-202ENST00000399256 A0A1W2PRG6 482 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 UBL3O95164 117 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 RAB3BP20337 219 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 MMP15P51511 669 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 GBX2P52951 348 aaPredicted RBP13.02□□□□□ -0.33
APOB-202ENST00000399256 OPCMLQ14982 345 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 ZNF805Q5CZA5 627 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 TCTE1Q5JU00 501 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 PARS2Q7L3T8 475 aaKnown RBP13.02□□□□□ -0.33
APOB-202ENST00000399256 OR56B4Q8NH76 319 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 SLC41A3Q96GZ6 507 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 C4orf36Q96KX1 117 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 KLHL15Q96M94 604 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 OR7D2Q96RA2 312 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 MCHR1Q99705 422 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 MS4A7Q9GZW8 240 aaPredicted RBP13.02□□□□□ -0.33
APOB-202ENST00000399256 MKI67P46013 3256 aaKnown RBP13.02□□□□□ -0.33
APOB-202ENST00000399256 LCMT2O60294 686 aaKnown RBP13.02□□□□□ -0.33
APOB-202ENST00000399256 ZGLP1P0C6A0 271 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 ATF1P18846 271 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 CCR8P51685 355 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 RAB33AQ14088 237 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 MLC1Q15049 377 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 FCRLBQ6BAA4 426 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 OR4C11Q6IEV9 310 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 ZNF793Q6ZN11 406 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 MEPCEQ7L2J0 689 aaKnown RBP13.02□□□□□ -0.33
APOB-202ENST00000399256 TCEAL8Q8IYN2 117 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 AHCYL2Q96HN2 611 aaKnown RBP13.02□□□□□ -0.33
APOB-202ENST00000399256 CXorf58Q96LI9 332 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 JAM3Q9BX67 310 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 SLC46A2Q9BY10 475 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 ENKD1Q9H0I2 346 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 OR10A4Q9H209 315 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 OR51V1Q9H2C8 321 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 SDHAF2Q9NX18 166 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 RPS6KB2Q9UBS0 482 aa13.02□□□□□ -0.33
APOB-202ENST00000399256 MYO10Q9HD67 2058 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 KIAA0100Q14667 2235 aaKnown RBP13.01□□□□□ -0.33
APOB-202ENST00000399256 TEX46H3BTG2 121 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 KPNA3O00505 521 aaPredicted RBP13.01□□□□□ -0.33
APOB-202ENST00000399256 KLF4O43474 513 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 PPM1BO75688 479 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 HMGN1P05114 100 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 ICAM2P13598 275 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 GPR1P46091 355 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 VEGFCP49767 419 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 CLDN2P57739 230 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 ZMYND11Q15326 602 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 DECR1Q16698 335 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 ACSM3Q53FZ2 586 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 GET4Q7L5D6 327 aaPredicted RBP13.01□□□□□ -0.33
APOB-202ENST00000399256 TPRA1Q86W33 373 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 GID4Q8IVV7 300 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 KAT2AQ92830 837 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 DTD2Q96FN9 168 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 WBP1Q96G27 269 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 SFXN2Q96NB2 322 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 NDC1Q9BTX1 674 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 DPH1Q9BZG8 443 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 ZC4H2Q9NQZ6 224 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 POMT2Q9UKY4 750 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 TBX21Q9UL17 535 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 ZMIZ1Q9ULJ6 1067 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 SLC7A7Q9UM01 511 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 KCNMB2Q9Y691 235 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 POM121CA8CG34 1229 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 NUPL2O15504 423 aaKnown RBP13.01□□□□□ -0.33
APOB-202ENST00000399256 GMDSO60547 372 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 FCMRO60667 390 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 CXCL10P02778 98 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 MT-ND5P03915 603 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 UGT2B7P16662 529 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 OR12D2P58182 307 aa13.01□□□□□ -0.33
APOB-202ENST00000399256 PITPNAQ00169 270 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms