RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PRKCDQ05655 676 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 PDE7AQ13946 482 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 SLC25A25Q6KCM7 469 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 HMBOX1Q6NT76 420 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 SDR9C7Q8NEX9 313 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR5AK2Q8NH90 309 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 THAP6Q8TBB0 222 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR1E3Q8WZA6 343 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 METTL8Q9H825 291 aaKnown RBP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 MEGF11A6BM72 1044 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 CLDN24A6NM45 220 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 TEX46H3BTG2 121 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 ATE1O95260 518 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZNF43P17038 809 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 ILKQ13418 452 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZNF584Q8IVC4 421 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR5W2Q8NH69 310 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 PITX2Q99697 317 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 NUDT15Q9NV35 164 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZNF831Q5JPB2 1677 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR2AT4A6NND4 320 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 ACP2P11117 423 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 ADPRHP54922 357 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 NKX3-2P78367 333 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 MLLT11Q13015 90 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 NTRK2Q16620 822 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 TP53I3Q53FA7 332 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 WBP2NLQ6ICG8 309 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 ADAMTS19Q8TE59 1207 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 SPRYD4Q8WW59 207 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 CACNG6Q9BXT2 260 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 INPP5EQ9NRR6 644 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 UCKL1Q9NWZ5 548 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 BCAT2O15382 392 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 EGFP01133 1207 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 DLX2Q07687 328 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 OCLNQ16625 522 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 UEVLDQ8IX04 471 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 MUL1Q969V5 352 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 NDUFAF4Q9P032 175 aa13.31□□□□□ -0.28
PCDHGA11-201ENST00000398587 LOC100509620A0A075B734 347 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 A6NIZ1 184 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 ANKRD28O15084 1053 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 CDK4P11802 303 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 RAP1BP61224 184 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 RAP1AP62834 184 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 CBFBQ13951 182 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 LAS2Q8IYD9 372 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZBTB8BQ8NAP8 495 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 ELP5Q8TE02 316 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 PDXPQ96GD0 296 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 C1GALT1Q9NS00 363 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 HPF1Q9NWY4 346 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 C14orf166Q9Y224 244 aaKnown RBP13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 FAM183AA6NL82 134 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 SNAPC5O75971 98 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 ERVK-25P63136 954 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 PYCR3Q53H96 274 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 PRAMEF8Q5VWM4 474 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 PRAMEF7Q5VXH5 474 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 EIF5AL1Q6IS14 154 aaKnown RBP13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 MEPCEQ7L2J0 689 aaKnown RBP13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 LRRC56Q8IYG6 542 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 TMEFF1Q8IYR6 380 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 DTX3Q8N9I9 347 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR8S1Q8NH09 359 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 SGPP1Q9BX95 441 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 SLC6A17Q9H1V8 727 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 MED17Q9NVC6 651 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZNF337Q9Y3M9 751 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 SHROOM3Q8TF72 1996 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 TEX13DA0A0J9YY54 714 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 FAM171A2A8MVW0 826 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 MAS1P04201 325 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 OTX2P32243 289 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 TPMTP51580 245 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 GALK2Q01415 458 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 ERV3-1Q14264 604 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 MANEAQ5SRI9 462 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 PYHIN1Q6K0P9 492 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 NLRP8Q86W28 1048 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 SPNS2Q8IVW8 549 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 UBQLNLQ8IYU4 475 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 PIAS4Q8N2W9 510 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR13H1Q8NG92 308 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 ELP4Q96EB1 424 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 QRSL1Q9H0R6 528 aaKnown RBP13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 FAIMQ9NVQ4 179 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 NOX1Q9Y5S8 564 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 LRIT2A6NDA9 550 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 LCN1P31025 176 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 PRKAR1BP31321 381 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR1D4P47884 311 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 PER3P56645 1201 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 GAB1Q13480 694 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 NR0B2Q15466 257 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 LTB4RQ15722 352 aa13.3□□□□□ -0.28
PCDHGA11-201ENST00000398587 IGFN1Q86VF2 1251 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms