RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ZNF628Q5EBL2 1059 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZNF542PQ5EBM4 170 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 NRARPQ7Z6K4 114 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZNF761Q86XN6 746 aaPredicted RBP17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CAMKK1Q8N5S9 505 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 UFD1Q92890 307 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 MRPL38Q96DV4 380 aaKnown RBP17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 DCLRE1CQ96SD1 692 aaKnown RBP17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZFYVE21Q9BQ24 234 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ARHGAP9Q9BRR9 750 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 DPH1Q9BZG8 443 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TCEAL2Q9H3H9 227 aaPredicted RBP17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CACYBPQ9HB71 228 aaKnown RBP17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CAPN10Q9HC96 672 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 KCNE5Q9UJ90 142 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 IQCMA0A1B0GVH7 501 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 A0A1W2PQL4 384 aaPredicted RBP17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 URADA6NGE7 173 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SOCS6O14544 535 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 APBB3O95704 486 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 NT5EP21589 574 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 GCGRP47871 477 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TPMTP51580 245 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TPBGQ13641 420 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 EXOSC7Q15024 291 aaKnown RBP17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZNF791Q3KP31 576 aaPredicted RBP17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 FIGNL1Q6PIW4 674 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 WDR88Q6ZMY6 472 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ABHD13Q7L211 337 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CAMKVQ8NCB2 501 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZFPM2Q8WW38 1151 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 MIXL1Q9H2W2 232 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PTGFRNQ9P2B2 879 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TRAPPC4Q9Y296 219 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 EXOSC1Q9Y3B2 195 aaKnown RBP17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 STK25O00506 426 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SLC30A4O14863 429 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CPNE3O75131 537 aaKnown RBP17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 AGR2O95994 175 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 HTR2AP28223 471 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 AP2S1P53680 142 aaPredicted RBP17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PPP1CAP62136 330 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SHC2P98077 582 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 DUSP8Q13202 625 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 INSL4Q14641 139 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SAMD14Q8IZD0 417 aaPredicted RBP17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ASB12Q8WXK4 309 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 NEDD4LQ96PU5 975 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 KATNB1Q9BVA0 655 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ENKD1Q9H0I2 346 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 S1PR5Q9H228 398 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 FBRSQ9HAH7 460 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SLC28A3Q9HAS3 691 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 HINT3Q9NQE9 182 aaKnown RBP17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ACOXLQ9NUZ1 547 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SCML1Q9UN30 329 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CLCA2Q9UQC9 943 aa17.05■□□□□ 0.32
CHRFAM7A-202ENST00000397827 IRGMA1A4Y4 181 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TRIM77I1YAP6 450 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ATP6V1E1P36543 226 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 KRR1Q13601 381 aaKnown RBP17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TAB1Q15750 504 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 DCST2Q5T1A1 773 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 MRPL2Q5T653 305 aaKnown RBP17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SMARCD3Q6STE5 483 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 KCTD20Q7Z5Y7 419 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CPOQ8IVL8 374 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZNF485Q8NCK3 441 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 OR2T33Q8NG76 320 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PFN4Q8NHR9 129 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 RFKQ969G6 155 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 RERGQ96A58 199 aaPredicted RBP17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PRSS27Q9BQR3 290 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TMED9Q9BVK6 235 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PIGUQ9H490 435 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 C20orf141Q9NUB4 165 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 NLGN3Q9NZ94 848 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 C19orf53Q9UNZ5 99 aaPredicted RBP17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 MN1Q10571 1320 aaPredicted RBP17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SYNDIG1LA6NDD5 238 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 AGRPO00253 132 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 YES1P07947 543 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZGLP1P0C6A0 271 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ATF4P18848 351 aaPredicted RBP17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 UQCRC1P31930 480 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 RFX3P48380 749 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 FHL5Q5TD97 284 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 FAM122CQ6P4D5 195 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 FAM131AQ6UXB0 335 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 Q6ZSR6 202 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 RIPOR3Q96MK2 946 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 GDF15Q99988 308 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 HDHD5Q9BXW7 423 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SRRQ9GZT4 340 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZNF350Q9GZX5 532 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TBC1D17Q9HA65 648 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CBLCQ9ULV8 474 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CDH10Q9Y6N8 788 aa17.04■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZC3H12DA2A288 527 aaKnown RBP17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CELA2BP08218 269 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms