RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 SMURF2Q9HAU4 748 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 SMPD3Q9NY59 655 aaPredicted RBP17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 TMEFF2Q9UIK5 374 aaPredicted RBP17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 RAB26Q9ULW5 256 aa17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 MRPS18BQ9Y676 258 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-205ENST00000397761 TRBV4-1A0A0J9YWV2 114 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 MED19A0JLT2 244 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 ADAM11O75078 769 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 OR2J2O76002 312 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 SERPINA7P05543 415 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 GKN3PP0CG01 181 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 THRBP10828 461 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 ACADSP16219 412 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 TMED10P49755 219 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 SKP2Q13309 424 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 LAPTM4AQ15012 233 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 CD226Q15762 336 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 ZNF550Q7Z398 422 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 NUP54Q7Z3B4 507 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 TOR1AIP2Q8NFQ8 470 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 SLC7A13Q8TCU3 470 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 ADAMTS16Q8TE57 1224 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 ZNF559Q9BR84 538 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 OSBPL11Q9BXB4 747 aa17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 GPN2Q9H9Y4 310 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-205ENST00000397761 AKAP13Q12802 2813 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 CPSF4LA6NMK7 179 aaKnown RBP17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 FAAHO00519 579 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 CYP7B1O75881 506 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 THY1P04216 161 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 UQCRBP14927 111 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 HPGDP15428 266 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 EVI2BP34910 448 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 RNF144AP50876 292 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 DAPP51397 102 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 TAS2R41P59536 307 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 ST3GAL3Q11203 375 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 WLSQ5T9L3 541 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 ANKRD34AQ69YU3 496 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 PLEKHM3Q6ZWE6 761 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 LSMEM1Q8N8F7 131 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 KIAA1143Q96AT1 154 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 RTN4RQ9BZR6 473 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 ZBTB20Q9HC78 741 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 NTNG1Q9Y2I2 539 aa17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 YARS2Q9Y2Z4 477 aaKnown RBP17.86■□□□□ 0.45
PDLIM2-205ENST00000397761 SH3PXD2BA1X283 911 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 TRAPPC13A5PLN9 417 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 H3BNH8 94 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 ZNF264O43296 627 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 LYPD3O95274 346 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 UBTFL6P0CB48 400 aaPredicted RBP17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 ITGAMP11215 1152 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 UBL4AP11441 157 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 ANXA8P13928 327 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 CBLP22681 906 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 IFNA8P32881 189 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 FBXW4P57775 412 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 MLF1P58340 268 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 EPS8Q12929 822 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 ATP1A4Q13733 1029 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 TRAM2Q15035 370 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 SEC23BQ15437 767 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 TAF11Q15544 211 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 TGIF1Q15583 401 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 NTRK2Q16620 822 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 RFX4Q33E94 735 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 ZNF791Q3KP31 576 aaPredicted RBP17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 DCST1Q5T197 706 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 ZNF613Q6PF04 617 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 GDF7Q7Z4P5 450 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 LINC00471Q8N535 108 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 OR10G2Q8NGC3 310 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 SPACA9Q96E40 222 aaPredicted RBP17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 TRIM2Q9C040 744 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 LAT2Q9GZY6 243 aa17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 TPRP12270 2363 aaKnown RBP17.85■□□□□ 0.45
PDLIM2-205ENST00000397761 DENRO43583 198 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 EIF4E2O60573 245 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 ITGA10O75578 1167 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 CCNB2O95067 398 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 LIFP15018 202 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 OR1Q1Q15612 314 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 RPS19BP1Q86WX3 136 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 DND1Q8IYX4 353 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 SLC5A8Q8N695 610 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 GRHL3Q8TE85 626 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 TFAP2CQ92754 450 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 TMCO6Q96DC7 493 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 NXPE2Q96DL1 559 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 SLC41A3Q96GZ6 507 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 NODALQ96S42 347 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 FEVQ99581 238 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 CTPS2Q9NRF8 586 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 TMCC3Q9ULS5 477 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 LRCH1Q9Y2L9 728 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 AP4B1Q9Y6B7 739 aa17.84■□□□□ 0.45
PDLIM2-205ENST00000397761 A0A0B4J2E0 115 aa17.83■□□□□ 0.45
PDLIM2-205ENST00000397761 A0A1B0GX12 115 aa17.83■□□□□ 0.45
PDLIM2-205ENST00000397761 OIP5O43482 229 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms