RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 IGLV3-32A0A0A0MS00 114 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 CD8B2A6NJW9 211 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 FAM90A27PA6NNH2 459 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 ALG1L2C9J202 215 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 ZIC3O60481 467 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 PGRP06401 933 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 TBXA2RP21731 343 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 TIMP3P35625 211 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 ADH7P40394 386 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 POLR2JP52435 117 aaKnown RBP13.21□□□□□ -0.3
SEC13-208ENST00000397109 GFRA1P56159 465 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 NME5P56597 212 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 WNT3P56703 355 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 HBA1P69905 142 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 PHC1P78364 1004 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 LRRC74AQ0VAA2 488 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 TP53BP2Q13625 1128 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 SLC25A35Q3KQZ1 300 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 GRAMD1BQ3KR37 738 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 ANXA8L1Q5VT79 327 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 ARPINQ7Z6K5 226 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 MARCH3Q86UD3 253 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 FBXO30Q8TB52 745 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 ADAMTS15Q8TE58 950 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 NUDT8Q8WV74 236 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 ASB9Q96DX5 294 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 SPDL1Q96EA4 605 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 CLPTM1LQ96KA5 538 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 GPATCH1Q9BRR8 931 aaKnown RBP13.21□□□□□ -0.3
SEC13-208ENST00000397109 UBQLN4Q9NRR5 601 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 MED11Q9P086 117 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 TMEM181Q9P2C4 612 aa13.21□□□□□ -0.3
SEC13-208ENST00000397109 PRSS51A0A1B0GVH4 220 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 C19orf84I3L1E1 186 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 LINC01387J3KSC0 135 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 TOXO94900 526 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 OXSR1O95747 527 aaPredicted RBP13.2□□□□□ -0.3
SEC13-208ENST00000397109 ANGPTL1O95841 491 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 IL2RAP01589 272 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 HPGDP15428 266 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 ATP6V1C1P21283 382 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 CEACAM8P31997 349 aaPredicted RBP13.2□□□□□ -0.3
SEC13-208ENST00000397109 S100A3P33764 101 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 TRIM25Q14258 630 aaKnown RBP13.2□□□□□ -0.3
SEC13-208ENST00000397109 BCL2A1Q16548 175 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 GLYR1Q49A26 553 aaPredicted RBP13.2□□□□□ -0.3
SEC13-208ENST00000397109 DCST1Q5T197 706 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 OR4F3Q6IEY1 312 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 FIGNL1Q6PIW4 674 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 SEM1Q6ZVN7 128 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 MISPQ8IVT2 679 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 MCEMP1Q8IX19 187 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 DPP10Q8N608 796 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 OR4C3Q8NH37 302 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 GOT1L1Q8NHS2 421 aaPredicted RBP13.2□□□□□ -0.3
SEC13-208ENST00000397109 UCK2Q9BZX2 261 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 ENKD1Q9H0I2 346 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 GPATCH2Q9NW75 528 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 ABCD2Q9UBJ2 740 aa13.2□□□□□ -0.3
SEC13-208ENST00000397109 PCNX3Q9H6A9 2034 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 CCDC154A6NI56 674 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 DUXAA6NLW8 204 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 H0Y3Z8 333 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 SCDO00767 359 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 NDUFB5O43674 189 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 ANP32DO95626 131 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 PEPDP12955 493 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 HK1P19367 917 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 MSX1P28360 303 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 SOAT1P35610 550 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 APOOLQ6UXV4 268 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 GDF7Q7Z4P5 450 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 ACBD4Q8NC06 268 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 CDS1Q92903 461 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 C1GALT1C1Q96EU7 318 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 CCDC115Q96NT0 180 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 TRIB1Q96RU8 372 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 RTN4RQ9BZR6 473 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 HOXD1Q9GZZ0 328 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 MUC13Q9H3R2 512 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 S100A14Q9HCY8 104 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 ZNF629Q9UEG4 869 aaPredicted RBP13.19□□□□□ -0.3
SEC13-208ENST00000397109 CD300AQ9UGN4 299 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 BTNL2Q9UIR0 455 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 RPH3AQ9Y2J0 694 aaPredicted RBP13.19□□□□□ -0.3
SEC13-208ENST00000397109 AP3M1Q9Y2T2 418 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 L3MBTL1Q9Y468 752 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 HCFC1P51610 2035 aa13.19□□□□□ -0.3
SEC13-208ENST00000397109 A0A1W2PQD3 144 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 NKX2-6A6NCS4 301 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 MBD3L4A6NDZ8 208 aaPredicted RBP13.18□□□□□ -0.3
SEC13-208ENST00000397109 MBD3L3A6NE82 208 aaPredicted RBP13.18□□□□□ -0.3
SEC13-208ENST00000397109 MBD3L5A6NJ08 208 aaPredicted RBP13.18□□□□□ -0.3
SEC13-208ENST00000397109 B4DXG7 233 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 C9JVG2 144 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 NR5A2O00482 541 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 DVL2O14641 736 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 DNAJA2O60884 412 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 STAMBPO95630 424 aa13.18□□□□□ -0.3
SEC13-208ENST00000397109 CD1EP15812 388 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms