RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SVEP1Q4LDE5 3571 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 ULK1O75385 1050 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 ANXA4P09525 319 aaPredicted RBP13.22□□□□□ -0.29
SEC13-206ENST00000397102 LINGO3P0C6S8 592 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 EIF1P41567 113 aaKnown RBP13.22□□□□□ -0.29
SEC13-206ENST00000397102 OR3A2P47893 321 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 GUCY2DQ02846 1103 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 CLCQ05315 142 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 ZNF763Q0D2J5 394 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 C2orf80Q0P641 193 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 RASA2Q15283 850 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 UAP1Q16222 522 aaPredicted RBP13.22□□□□□ -0.29
SEC13-206ENST00000397102 TSNAXIP1Q2TAA8 658 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 TMEM108Q6UXF1 575 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 MISPQ8IVT2 679 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 SLC43A2Q8N370 569 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 OR2W6PQ8NHA6 318 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 HOXB13Q92826 284 aaPredicted RBP13.22□□□□□ -0.29
SEC13-206ENST00000397102 SH3YL1Q96HL8 342 aaPredicted RBP13.22□□□□□ -0.29
SEC13-206ENST00000397102 BCO1Q9HAY6 547 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 MIEF1Q9NQG6 463 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 SIRT5Q9NXA8 310 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 TAS2R7Q9NYW3 318 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 PRSS50Q9UI38 385 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 POU2F3Q9UKI9 436 aa13.22□□□□□ -0.29
SEC13-206ENST00000397102 LOC100289279A0A1B0GTE1 492 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 GJE1A6NN92 205 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 A8MT66 165 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 NKX2-2O95096 273 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 PGM3O95394 542 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 GGT1P19440 569 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 COX5AP20674 150 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 HSD17B3P37058 310 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 MAP3K8P41279 467 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 MAGEA12P43365 314 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 EFNA4P52798 201 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 PLTPP55058 493 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 CAV1Q03135 178 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 FOXF1Q12946 379 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 VPS26BQ4G0F5 336 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 UBAP2Q5T6F2 1119 aaKnown RBP13.21□□□□□ -0.29
SEC13-206ENST00000397102 SLC22A25Q6T423 547 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 MEX3DQ86XN8 651 aaKnown RBP13.21□□□□□ -0.29
SEC13-206ENST00000397102 MMGT1Q8N4V1 131 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 B4GALNT2Q8NHY0 566 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 CDC26Q8NHZ8 85 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 FBXO25Q8TCJ0 367 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 GPR151Q8TDV0 419 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 AMDHD1Q96NU7 426 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 KLHDC3Q9BQ90 382 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 MRPL57Q9BQC6 102 aaKnown RBP13.21□□□□□ -0.29
SEC13-206ENST00000397102 PSD2Q9BQI7 771 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 PLA2G12AQ9BZM1 189 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 MRPL46Q9H2W6 279 aaKnown RBP13.21□□□□□ -0.29
SEC13-206ENST00000397102 COQ10BQ9H8M1 238 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 KLHL9Q9P2J3 617 aa13.21□□□□□ -0.29
SEC13-206ENST00000397102 OR5H1A6NKK0 313 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 RAD51CO43502 376 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 RGS14O43566 566 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 SPRY1O43609 319 aaPredicted RBP13.2□□□□□ -0.3
SEC13-206ENST00000397102 EFNA2O43921 213 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 DHRS4L1P0CG22 281 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 COL6A2P12110 1019 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 IGHV1-2P23083 117 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 PTAFRP25105 342 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 HMOX2P30519 316 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 PRIM2P49643 509 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 HTR6P50406 440 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 FABP6P51161 128 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 FAM71E1Q6IPT2 247 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 ZNF544Q6NX49 715 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 RFLNBQ8N5W9 214 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 METTL6Q8TCB7 284 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 MSI2Q96DH6 328 aaKnown RBP13.2□□□□□ -0.3
SEC13-206ENST00000397102 ZNF382Q96SR6 550 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 CXorf36Q9H7Y0 433 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 EML4Q9HC35 981 aaKnown RBP13.2□□□□□ -0.3
SEC13-206ENST00000397102 EQTNQ9NQ60 294 aa13.2□□□□□ -0.3
SEC13-206ENST00000397102 ING1Q9UK53 422 aaPredicted RBP13.2□□□□□ -0.3
SEC13-206ENST00000397102 A0A1W2PQD3 144 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 VWC2LB2RUY7 222 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 KIF2AO00139 706 aaPredicted RBP13.19□□□□□ -0.3
SEC13-206ENST00000397102 SBK3P0C264 359 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 PRPS2P11908 318 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 BMP4P12644 408 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 HPGDP15428 266 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 ENPP1P22413 925 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 LCN1P31025 176 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 BTKQ06187 659 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 SPOCK1Q08629 439 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 GGTLC2Q14390 218 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 TMEM176BQ3YBM2 270 aaPredicted RBP13.19□□□□□ -0.3
SEC13-206ENST00000397102 ARL13AQ5H913 290 aaPredicted RBP13.19□□□□□ -0.3
SEC13-206ENST00000397102 B3GLCTQ6Y288 498 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 GPRIN3Q6ZVF9 776 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 DEPDC4Q8N2C3 294 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 CDRT4Q8N9R6 151 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 OR6Y1Q8NGX8 325 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.19□□□□□ -0.3
SEC13-206ENST00000397102 FAM110BQ8TC76 370 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms