RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 NPPAP01160 153 aa16.4■□□□□ 0.22
MCF2L-208ENST00000397030 SSTP61278 116 aa16.4■□□□□ 0.22
MCF2L-208ENST00000397030 SIAH1Q8IUQ4 282 aa16.4■□□□□ 0.22
MCF2L-208ENST00000397030 DTD2Q96FN9 168 aa16.4■□□□□ 0.22
MCF2L-208ENST00000397030 RANBP9Q96S59 729 aa16.4■□□□□ 0.22
MCF2L-208ENST00000397030 TAS2R3Q9NYW6 316 aa16.4■□□□□ 0.22
MCF2L-208ENST00000397030 ATP23Q9Y6H3 246 aa16.4■□□□□ 0.22
MCF2L-208ENST00000397030 GABRR3A8MPY1 467 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 TGM4P49221 684 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 ARL16Q0P5N6 197 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 GPR50Q13585 617 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 P2RY14Q15391 338 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 SLC22A6Q4U2R8 563 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 EXOSC6Q5RKV6 272 aaKnown RBP16.39■□□□□ 0.21
MCF2L-208ENST00000397030 CDRT4Q8N9R6 151 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 SUN5Q8TC36 379 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 TCTN2Q96GX1 697 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 D6RAR5 112 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 CAPN3P20807 821 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 HOXA9P31269 272 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 CD93Q9NPY3 652 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 DMRT3Q9NQL9 472 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 S100A12P80511 92 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 SFT2D3Q587I9 215 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 RNASE10Q5GAN6 216 aaKnown RBP16.39■□□□□ 0.21
MCF2L-208ENST00000397030 FAM160A2Q8N612 972 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-208ENST00000397030 OR8J3Q8NGG0 315 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 TRAPPC2LQ9UL33 140 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 SPO11Q9Y5K1 396 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 COL1A1P02452 1464 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-208ENST00000397030 H2AFB2P0C5Z0 115 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 GLO1Q04760 184 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 ERMP1Q7Z2K6 904 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 NPWQ8N729 165 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 GPR26Q8NDV2 337 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 PSMF1Q92530 271 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 NEIL2Q969S2 332 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 ATP13A2Q9NQ11 1180 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 SEC14L4Q9UDX3 406 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 hCG_1809904A0A1W2PP81 198 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 A0A1W2PPE2 198 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 A0A1W2PR64 198 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 A0A1W2PRV1 198 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 A6NHS1 94 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 UGDHO60701 494 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 CARD18P57730 90 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 LDLRAD1Q5T700 205 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 SLC46A3Q7Z3Q1 461 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 VN1R3Q9BXE9 311 aa16.39■□□□□ 0.21
MCF2L-208ENST00000397030 ZNF891A8MT65 544 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-208ENST00000397030 FOXE1O00358 373 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-208ENST00000397030 IGHG1P01857 330 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 FDXRP22570 491 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 PTGS2P35354 604 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 HTR3AP46098 478 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 SFXN5Q8TD22 340 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 SNAPC5O75971 98 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 IGHV3-9P01782 118 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 YES1P07947 543 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 NFYBP25208 207 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 HMGCLP35914 325 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 TM4SF4P48230 202 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 GRPEL2Q8TAA5 225 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 OLAHQ9NV23 265 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 GNG13Q9P2W3 67 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 NDUFB2O95178 105 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 PCBD1P61457 104 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 MVKQ03426 396 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 STEAP4Q687X5 459 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 MKXQ8IYA7 352 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 OR1N1Q8NGS0 311 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 MEPEQ9NQ76 525 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-208ENST00000397030 SLC23A2Q9UGH3 650 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 SUSD5O60279 629 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 UGT2B7P16662 529 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 TAZQ16635 292 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 AAED1Q7RTV5 226 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 MARVELD2Q8N4S9 558 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 SIRT6Q8N6T7 355 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 RSPRY1Q96DX4 576 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 TP63Q9H3D4 680 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-208ENST00000397030 B4DXG7 233 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 SLC16A7O60669 478 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 GJB3O75712 270 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 GYPBP06028 91 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 POU2F2P09086 479 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 EFNA3P52797 238 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 C6orf15Q6UXA7 325 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-208ENST00000397030 TMEM150AQ86TG1 271 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 ITFG2Q969R8 447 aa16.38■□□□□ 0.21
MCF2L-208ENST00000397030 MMP2P08253 660 aa16.37■□□□□ 0.21
MCF2L-208ENST00000397030 GSTP1P09211 210 aaKnown RBP16.37■□□□□ 0.21
MCF2L-208ENST00000397030 RPE65Q16518 533 aa16.37■□□□□ 0.21
MCF2L-208ENST00000397030 NAGSQ8N159 534 aa16.37■□□□□ 0.21
MCF2L-208ENST00000397030 TMIEQ8NEW7 156 aa16.37■□□□□ 0.21
MCF2L-208ENST00000397030 DCLRE1CQ96SD1 692 aaKnown RBP16.37■□□□□ 0.21
MCF2L-208ENST00000397030 WWTR1Q9GZV5 400 aa16.37■□□□□ 0.21
MCF2L-208ENST00000397030 XYLT2Q9H1B5 865 aa16.37■□□□□ 0.21
MCF2L-208ENST00000397030 KLRC4-KLRK1H3BQV0 150 aa16.37■□□□□ 0.21
MCF2L-208ENST00000397030 SULT1B1O43704 296 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms