RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 SH2D2AQ9NP31 389 aa12.89□□□□□ -0.35
GAPDH-203ENST00000396858 VNN3Q9NY84 501 aa12.89□□□□□ -0.35
GAPDH-203ENST00000396858 PLA2G3Q9NZ20 509 aa12.89□□□□□ -0.35
GAPDH-203ENST00000396858 TESQ9UGI8 421 aaKnown RBP12.89□□□□□ -0.35
GAPDH-203ENST00000396858 TESMINQ9Y4I5 508 aa12.89□□□□□ -0.35
GAPDH-203ENST00000396858 WIF1Q9Y5W5 379 aa12.89□□□□□ -0.35
GAPDH-203ENST00000396858 ENPP4Q9Y6X5 453 aa12.89□□□□□ -0.35
GAPDH-203ENST00000396858 DOCK10Q96BY6 2186 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 C2orf72A6NCS6 295 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 GTPBP1O00178 669 aaKnown RBP12.88□□□□□ -0.35
GAPDH-203ENST00000396858 ZNF264O43296 627 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 HCRTR2O43614 444 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 SEMA7AO75326 666 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 CST1P01037 141 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 HTR2AP28223 471 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 CYB561P49447 251 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 CLK3P49761 638 aaKnown RBP12.88□□□□□ -0.35
GAPDH-203ENST00000396858 GAS1P54826 345 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 RPP38P78345 283 aaKnown RBP12.88□□□□□ -0.35
GAPDH-203ENST00000396858 SPIBQ01892 262 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 MFAP5Q13361 173 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 ATP6AP1Q15904 470 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 CBLN3Q6UW01 205 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 PLEKHM3Q6ZWE6 761 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 MDGA2Q7Z553 956 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 RANBP3LQ86VV4 465 aaPredicted RBP12.88□□□□□ -0.35
GAPDH-203ENST00000396858 ZNF227Q86WZ6 799 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 GRAMD2AQ8IUY3 354 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 APLFQ8IW19 511 aaPredicted RBP12.88□□□□□ -0.35
GAPDH-203ENST00000396858 GPALPP1Q8IXQ4 340 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 PHF10Q8WUB8 498 aaKnown RBP12.88□□□□□ -0.35
GAPDH-203ENST00000396858 PRRC1Q96M27 445 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 UTP23Q9BRU9 249 aaKnown RBP12.88□□□□□ -0.35
GAPDH-203ENST00000396858 DCLRE1BQ9H816 532 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 AGPAT4Q9NRZ5 378 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 STMN3Q9NZ72 180 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 STX18Q9P2W9 335 aaKnown RBP12.88□□□□□ -0.35
GAPDH-203ENST00000396858 RHCGQ9UBD6 479 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 MED13Q9UHV7 2174 aa12.88□□□□□ -0.35
GAPDH-203ENST00000396858 B4DXG7 233 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 K7ENP7 123 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 HNRNPRO43390 633 aaKnown RBP12.87□□□□□ -0.35
GAPDH-203ENST00000396858 TPST2O60704 377 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 LDLRP01130 860 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 HOXB6P17509 224 aaKnown RBP12.87□□□□□ -0.35
GAPDH-203ENST00000396858 FUT4P22083 530 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 FASP25445 335 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 RRM2P31350 389 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 RYKP34925 604 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 CD96P40200 585 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 CASP3P42574 277 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 IST1P53990 364 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 TMPRSS3P57727 454 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 EPS8Q12929 822 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 FOXD4Q12950 439 aaPredicted RBP12.87□□□□□ -0.35
GAPDH-203ENST00000396858 OR1C1Q15619 314 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 OR5M10Q6IEU7 315 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 INO80CQ6PI98 192 aaPredicted RBP12.87□□□□□ -0.35
GAPDH-203ENST00000396858 PIWIL3Q7Z3Z3 882 aaKnown RBP12.87□□□□□ -0.35
GAPDH-203ENST00000396858 PSD4Q8NDX1 1056 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 SIGLEC12Q96PQ1 595 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 SECISBP2Q96T21 854 aaKnown RBP12.87□□□□□ -0.35
GAPDH-203ENST00000396858 MCHR1Q99705 422 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 PIP5K1AQ99755 562 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 HES7Q9BYE0 225 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 EXOSC3Q9NQT5 275 aaKnown RBP12.87□□□□□ -0.35
GAPDH-203ENST00000396858 PPP4R1LQ9P1A2 415 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 LRFN1Q9P244 771 aa12.87□□□□□ -0.35
GAPDH-203ENST00000396858 ZFHX4Q86UP3 3567 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 OR5H15A6NDH6 313 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 SAC3D1A6NKF1 404 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 TAF4O00268 1085 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 FFAR1O14842 300 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 CLOCKO15516 846 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 DEAF1O75398 565 aaPredicted RBP12.86□□□□□ -0.35
GAPDH-203ENST00000396858 SLC25A12O75746 678 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 CEACAM4O75871 244 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 NEURL1O76050 574 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 PRSS23O95084 383 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 ITGA2P17301 1181 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 ADH7P40394 386 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 CDH12P55289 794 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 TAS2R41P59536 307 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 GPR85P60893 370 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 PPP1R8Q12972 351 aaKnown RBP12.86□□□□□ -0.35
GAPDH-203ENST00000396858 KCNAB2Q13303 367 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 INPP5JQ15735 1006 aaPredicted RBP12.86□□□□□ -0.35
GAPDH-203ENST00000396858 ZSWIM7Q19AV6 140 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 COL28A1Q2UY09 1125 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 ENTPD8Q5MY95 495 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 SLC22A10Q63ZE4 541 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 OR2T5Q6IEZ7 315 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 TMEM81Q6P7N7 255 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 ZNF550Q7Z398 422 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 ZNF605Q86T29 641 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 CYP4Z1Q86W10 505 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 EPHX4Q8IUS5 362 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 MISPQ8IVT2 679 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 ZNF440Q8IYI8 595 aa12.86□□□□□ -0.35
GAPDH-203ENST00000396858 CADM2Q8N3J6 435 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms