RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TMEM120BA0PK00 339 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 SH3D21A4FU49 640 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 TRPC5OSA6NMA1 111 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 GJE1A6NN92 205 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 STX11O75558 287 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 CPSF4O95639 269 aaKnown RBP12.36□□□□□ -0.43
CXCL12-205ENST00000395794 DNASE1P24855 282 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 S100A3P33764 101 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 P2RX1P51575 399 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 ART1P52961 327 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 SUMO3P55854 103 aaPredicted RBP12.36□□□□□ -0.43
CXCL12-205ENST00000395794 CTBP2P56545 445 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 CD226Q15762 336 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 ATAD3BQ5T9A4 648 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 ATG16L1Q676U5 607 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 GTF2IRD2BQ6EKJ0 949 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 ESPNLQ6ZVH7 1005 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 C16orf62Q7Z3J2 963 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 SPATA19Q7Z5L4 167 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 BTLAQ7Z6A9 289 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 GTF2IRD2Q86UP8 949 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 GGNQ86UU5 652 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 CDC20BQ86Y33 519 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 CLECL1Q8IZS7 167 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 LILRA2Q8N149 483 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 TMCO5AQ8N6Q1 288 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 OR5D16Q8NGK9 328 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 OR10D3Q8NH80 312 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 NRGNQ92686 78 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 NINJ1Q92982 152 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 ARL8AQ96BM9 186 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 TESCQ96BS2 214 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 STARD4Q96DR4 205 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 REXO5Q96IC2 774 aaKnown RBP12.36□□□□□ -0.43
CXCL12-205ENST00000395794 SLC35G5Q96KT7 338 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 ZBTB18Q99592 522 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 MEAF6Q9HAF1 191 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 TIGARQ9NQ88 270 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 THAP1Q9NVV9 213 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 ELOVL5Q9NYP7 299 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 PROCRQ9UNN8 238 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 CARD8Q9Y2G2 431 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 EMC9Q9Y3B6 208 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 DTNAQ9Y4J8 743 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 KCNE3Q9Y6H6 103 aa12.36□□□□□ -0.43
CXCL12-205ENST00000395794 NPIPA5A0A0B4J1W7 369 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 FAM221AA4D161 298 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 NPIPA7E9PJI5 369 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 SLCO1B7G3V0H7 640 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 OPN1LWP04000 364 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 PABPC4LP0CB38 370 aaKnown RBP12.35□□□□□ -0.43
CXCL12-205ENST00000395794 NPIPA8P0DM63 369 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 UQCRC2P22695 453 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 CHI3L1P36222 383 aaPredicted RBP12.35□□□□□ -0.43
CXCL12-205ENST00000395794 KIR2DL2P43627 348 aaPredicted RBP12.35□□□□□ -0.43
CXCL12-205ENST00000395794 SLC18A1P54219 525 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 CARD18P57730 90 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 RPS26P62854 115 aaKnown RBP12.35□□□□□ -0.43
CXCL12-205ENST00000395794 ZNF117Q03924 483 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 HBMQ6B0K9 141 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 VWA1Q6PCB0 445 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 SPNS3Q6ZMD2 512 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 FAM214BQ7L5A3 538 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 ANKRD46Q86W74 232 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 TOR1AIP2Q8NFQ8 470 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 OR2V1Q8NHB1 315 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 RFWD2Q8NHY2 731 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 RAB3IL1Q8TBN0 382 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 SDF2Q99470 211 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 TMEM185BQ9H7F4 350 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 FANCFQ9NPI8 374 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 GLRX2Q9NS18 164 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 ZNF226Q9NYT6 803 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 ST6GALNAC2Q9UJ37 374 aa12.35□□□□□ -0.43
CXCL12-205ENST00000395794 GPC6Q9Y625 555 aaPredicted RBP12.35□□□□□ -0.43
CXCL12-205ENST00000395794 E9PBE3 544 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 TNFSF11O14788 317 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 ADAMDEC1O15204 470 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 HDAC3O15379 428 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 ZNF264O43296 627 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 CXCL13O43927 109 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 EIF4E2O60573 245 aaKnown RBP12.34□□□□□ -0.43
CXCL12-205ENST00000395794 LINGO3P0C6S8 592 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 CD8BP10966 210 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 UBL4AP11441 157 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 POU2F1P14859 743 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 ELK4P28324 431 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 ADH6P28332 368 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 CD79BP40259 229 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 PCYT1AP49585 367 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 RNF144AP50876 292 aaPredicted RBP12.34□□□□□ -0.43
CXCL12-205ENST00000395794 CCR4P51679 360 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 IST1P53990 364 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 MAGOHP61326 146 aaKnown RBP12.34□□□□□ -0.43
CXCL12-205ENST00000395794 FAM27E3Q08E93 113 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 CBFBQ13951 182 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 GPR68Q15743 365 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 ARHGAP11BQ3KRB8 267 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 FAM174BQ3ZCQ3 159 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 OGFOD2Q6N063 350 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms