RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 GOSR2O14653 212 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 GLSO94925 669 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-203ENST00000394872 CSNK1EP49674 416 aaKnown RBP9.76□□□□□ -0.85
COL4A6-203ENST00000394872 CNN3Q15417 329 aaKnown RBP9.76□□□□□ -0.85
COL4A6-203ENST00000394872 CMTM1Q8IZ96 169 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 AP1S3Q96PC3 154 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 OR7D2Q96RA2 312 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 OR6C1Q96RD1 312 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 GPN2Q9H9Y4 310 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-203ENST00000394872 PCDHGA8Q9Y5G5 932 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 CRYBG1Q9Y4K1 1723 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 MEGF11A6BM72 1044 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 NME4O00746 187 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 GJB3O75712 270 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 SDC1P18827 310 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 AGTR1P30556 359 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 S100A12P80511 92 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 OPN5Q6U736 354 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 MARVELD2Q8N4S9 558 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 OR5T1Q8NG75 326 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 SLC2A12Q8TD20 617 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 TOMM40LQ969M1 308 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 ARRDC3Q96B67 414 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 SENP5Q96HI0 755 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-203ENST00000394872 SULT4A1Q9BR01 284 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 LMF2Q9BU23 707 aaKnown RBP9.76□□□□□ -0.85
COL4A6-203ENST00000394872 OBP2BQ9NPH6 170 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 A0A1B0GV50 99 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 C12orf71A8MTZ7 269 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 HHLA1C9JL84 531 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 RFXAPO00287 272 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 GABRR1P24046 479 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 TRA2BP62995 288 aaKnown RBP9.76□□□□□ -0.85
COL4A6-203ENST00000394872 LRRC26Q2I0M4 334 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 PAGE3Q5JUK9 113 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 C9orf135Q5VTT2 229 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 TBC1D20Q96BZ9 403 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 INTS14Q96SY0 518 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 TWSG1Q9GZX9 223 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 ARL6Q9H0F7 186 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 B3GNT3Q9Y2A9 372 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 RHBDD3Q9Y3P4 386 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 CHD2O14647 1828 aaKnown RBP9.76□□□□□ -0.85
COL4A6-203ENST00000394872 C2orf72A6NCS6 295 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 HMX3A6NHT5 357 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 IGHEP01854 428 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 CHRM4P08173 479 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 FBXO45P0C2W1 286 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 IL7P13232 177 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 ICAM2P13598 275 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 HTR2AP28223 471 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 HLCSP50747 726 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 MAT1AQ00266 395 aaKnown RBP9.76□□□□□ -0.85
COL4A6-203ENST00000394872 AADACL4Q5VUY2 407 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 EDAQ92838 391 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 ACPTQ9BZG2 426 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 CD93Q9NPY3 652 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 GABRR3A8MPY1 467 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 SIGLEC6O43699 453 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 DBHP09172 617 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 CD53P19397 219 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 DCTP40126 519 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 CAMLGP49069 296 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 ADARB1P78563 741 aaKnown RBP9.76□□□□□ -0.85
COL4A6-203ENST00000394872 ARL6IP1Q15041 203 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 MLF2Q15773 248 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-203ENST00000394872 TMEM31Q5JXX7 168 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 CPZQ66K79 652 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 C6orf89Q6UWU4 347 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 GRAMD2AQ8IUY3 354 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 C19orf47Q8N9M1 422 aaKnown RBP9.76□□□□□ -0.85
COL4A6-203ENST00000394872 CXXC1Q9P0U4 656 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-203ENST00000394872 HSFX1Q9UBD0 423 aa9.76□□□□□ -0.85
COL4A6-203ENST00000394872 PTHP01270 115 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 YPEL5P62699 121 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 WBP2NLQ6ICG8 309 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 MUCL1Q96DR8 90 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 INSM2Q96T92 566 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-203ENST00000394872 POT1Q9NUX5 634 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 RGPD2P0DJD1 1756 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 TFPTP0C1Z6 253 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 RGS6P49758 472 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 SMAD2Q15796 467 aaKnown RBP9.75□□□□□ -0.85
COL4A6-203ENST00000394872 NKPD1Q17RQ9 610 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 PCGF3Q3KNV8 242 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 CTSL3PQ5NE16 218 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 CCNJQ5T5M9 372 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 ANKRD54Q6NXT1 300 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 VHLLQ6RSH7 139 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 PRSS48Q7RTY5 328 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 METTL25Q8N6Q8 603 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 VN1R2Q8NFZ6 395 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF337Q9Y3M9 751 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 FGF4P08620 206 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 CPMP14384 443 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 CHRNB4P30926 498 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 GABRA2P47869 451 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 HSD17B7P56937 341 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 GPR50Q13585 617 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 NKAIN2Q5VXU1 208 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms