RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 CDH10Q9Y6N8 788 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 ZC3H12DA2A288 527 aaKnown RBP13.63□□□□□ -0.23
CDH16-202ENST00000394055 TRAPPC13A5PLN9 417 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 SLC9B1P1A6NJY1 282 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 HRKO00198 91 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 CHST10O43529 356 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 ZGLP1P0C6A0 271 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 IFI30P13284 250 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 SPNP16150 400 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 PRKCAP17252 672 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 IGFBP4P22692 258 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 POU6F2P78424 691 aaPredicted RBP13.63□□□□□ -0.23
CDH16-202ENST00000394055 MAT1AQ00266 395 aaKnown RBP13.63□□□□□ -0.23
CDH16-202ENST00000394055 ZNF791Q3KP31 576 aaPredicted RBP13.63□□□□□ -0.23
CDH16-202ENST00000394055 LSMEM1Q8N8F7 131 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 OR2T33Q8NG76 320 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 OR4N2Q8NGD1 307 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 LRRC61Q9BV99 259 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 FGF20Q9NP95 211 aaPredicted RBP13.63□□□□□ -0.23
CDH16-202ENST00000394055 HINT3Q9NQE9 182 aaKnown RBP13.63□□□□□ -0.23
CDH16-202ENST00000394055 DUSP22Q9NRW4 184 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 NLGN3Q9NZ94 848 aa13.63□□□□□ -0.23
CDH16-202ENST00000394055 A0A087WV62 115 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 CDHR4A6H8M9 788 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 FAM221BA6H8Z2 402 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 OR5K4A6NMS3 321 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 CBX7O95931 251 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 LALBAP00709 142 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 CPEP16870 476 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 ATP6V1E1P36543 226 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 CTAG1AP78358 180 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 PLAURQ03405 335 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 MADCAM1Q13477 382 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 NNATQ16517 81 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 LRIT3Q3SXY7 679 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 AADACL4Q5VUY2 407 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 CCDC190Q86UF4 302 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 CPOQ8IVL8 374 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 LAX1Q8IWV1 398 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 VWA5B2Q8N398 1253 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 METTL27Q8N6F8 245 aaPredicted RBP13.62□□□□□ -0.23
CDH16-202ENST00000394055 COQ7Q99807 217 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 OR52D1Q9H346 318 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 UBQLN3Q9H347 655 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 WDR70Q9NW82 654 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 POMT2Q9UKY4 750 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 LOC110117498-PIK3R3F6TDL0 507 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 RPS4Y1P22090 263 aaKnown RBP13.62□□□□□ -0.23
CDH16-202ENST00000394055 AZGP1P25311 298 aaKnown RBP13.62□□□□□ -0.23
CDH16-202ENST00000394055 RORCP51449 518 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 CDONQ4KMG0 1287 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 CRTC2Q53ET0 693 aaPredicted RBP13.62□□□□□ -0.23
CDH16-202ENST00000394055 FANK1Q8TC84 345 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 TMEM239Q8WW34 195 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 KLHDC7BQ96G42 594 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 PEX11GQ96HA9 241 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 SLC30A2Q9BRI3 323 aa13.62□□□□□ -0.23
CDH16-202ENST00000394055 MRPS18AQ9NVS2 196 aaKnown RBP13.62□□□□□ -0.23
CDH16-202ENST00000394055 MYO15AQ9UKN7 3530 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 UNC119BA6NIH7 251 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 SSTR4P31391 388 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 SLC1A3P43003 542 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 RAB38P57729 211 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 FXYD6P3P58550 94 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 HNRNPA0Q13151 305 aaKnown RBP13.61□□□□□ -0.23
CDH16-202ENST00000394055 FCRLBQ6BAA4 426 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 PLBD1Q6P4A8 553 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 GDPGP1Q6ZNW5 385 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 CNOT9Q92600 299 aaKnown RBP13.61□□□□□ -0.23
CDH16-202ENST00000394055 PTCHD1Q96NR3 888 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 TEX12Q9BXU0 123 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 SEMA6CQ9H3T2 930 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 SIDT1Q9NXL6 827 aaKnown RBP13.61□□□□□ -0.23
CDH16-202ENST00000394055 WSB2Q9NYS7 404 aaPredicted RBP13.61□□□□□ -0.23
CDH16-202ENST00000394055 SDK1Q7Z5N4 2213 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 TMEM129A0AVI4 362 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 CCR5P51681 352 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 ZMAT1Q5H9K5 638 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 EXOSC6Q5RKV6 272 aaKnown RBP13.61□□□□□ -0.23
CDH16-202ENST00000394055 PDZK1Q5T2W1 519 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 AKAP14Q86UN6 197 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 PARGQ86W56 976 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 MCATQ8IVS2 390 aaKnown RBP13.61□□□□□ -0.23
CDH16-202ENST00000394055 C19orf47Q8N9M1 422 aaKnown RBP13.61□□□□□ -0.23
CDH16-202ENST00000394055 OR13C2Q8NGS9 318 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 RFKQ969G6 155 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 STACQ99469 402 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 SDHCQ99643 169 aaPredicted RBP13.61□□□□□ -0.23
CDH16-202ENST00000394055 CBLCQ9ULV8 474 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 EXOSC1Q9Y3B2 195 aaKnown RBP13.61□□□□□ -0.23
CDH16-202ENST00000394055 MTCH2Q9Y6C9 303 aa13.61□□□□□ -0.23
CDH16-202ENST00000394055 SPEGQ15772 3267 aa13.6□□□□□ -0.23
CDH16-202ENST00000394055 ISPDA4D126 451 aa13.6□□□□□ -0.23
CDH16-202ENST00000394055 TGFBR3LH3BV60 316 aa13.6□□□□□ -0.23
CDH16-202ENST00000394055 SSX4O60224 188 aa13.6□□□□□ -0.23
CDH16-202ENST00000394055 BRINP1O60477 761 aa13.6□□□□□ -0.23
CDH16-202ENST00000394055 KCNK2O95069 426 aa13.6□□□□□ -0.23
CDH16-202ENST00000394055 ALX3O95076 343 aa13.6□□□□□ -0.23
CDH16-202ENST00000394055 MAOBP27338 520 aa13.6□□□□□ -0.23
CDH16-202ENST00000394055 SDC2P34741 201 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms