RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 GOT1L1Q8NHS2 421 aaPredicted RBP9.85□□□□□ -0.83
CALD1-203ENST00000393118 DNAJA4Q8WW22 397 aaPredicted RBP9.85□□□□□ -0.83
CALD1-203ENST00000393118 GAL3ST3Q96A11 431 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 ELP4Q96EB1 424 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 SLC6A15Q9H2J7 730 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 DDX31Q9H8H2 851 aaKnown RBP9.85□□□□□ -0.83
CALD1-203ENST00000393118 MED20Q9H944 212 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 FBXO8Q9NRD0 319 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 COPZ2Q9P299 210 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 MBD2Q9UBB5 411 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 REV1Q9UBZ9 1251 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 A0A1W2PS29 197 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 RAB19A4D1S5 217 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 A8MVJ9 347 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 CASC3O15234 703 aaKnown RBP9.85□□□□□ -0.83
CALD1-203ENST00000393118 HIST1H2ABP04908 130 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 GYPBP06028 91 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 ACVR2AP27037 513 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 NAA10P41227 235 aaPredicted RBP9.85□□□□□ -0.83
CALD1-203ENST00000393118 ATP12AP54707 1039 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 TRA2BP62995 288 aaKnown RBP9.85□□□□□ -0.83
CALD1-203ENST00000393118 C1orf53Q5VUE5 145 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 SLC48A1Q6P1K1 146 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 HIST3H2AQ7L7L0 130 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 LAX1Q8IWV1 398 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 PIAS4Q8N2W9 510 aaPredicted RBP9.85□□□□□ -0.83
CALD1-203ENST00000393118 CEP76Q8TAP6 659 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 RLN3Q8WXF3 142 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 HIST1H2ACQ93077 130 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 PEX11GQ96HA9 241 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 HYLS1Q96M11 299 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 GINS4Q9BRT9 223 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 CCDC32Q9BV29 185 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 ALOXE3Q9BYJ1 711 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 TPSD1Q9BZJ3 242 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 PNO1Q9NRX1 252 aaKnown RBP9.85□□□□□ -0.83
CALD1-203ENST00000393118 TAS2R7Q9NYW3 318 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 A0A087WUU8 490 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 TRIM64A6NGJ6 449 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 TRIM64BA6NI03 449 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 GPR89AB7ZAQ6 455 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 LINC01565O15544 149 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 CEACAM5P06731 702 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 GPR89BP0CG08 455 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 ZNF3P17036 446 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 PXNP49023 591 aaPredicted RBP9.85□□□□□ -0.83
CALD1-203ENST00000393118 ADPRHP54922 357 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 FRRS1Q6ZNA5 592 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 PRICKLE2Q7Z3G6 844 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 NKAIN4Q8IVV8 208 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 PROKR2Q8NFJ6 384 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 ZG16BQ96DA0 208 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 SGTBQ96EQ0 304 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 PLA2G2FQ9BZM2 168 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 SCPEP1Q9HB40 452 aa9.85□□□□□ -0.83
CALD1-203ENST00000393118 POLMQ9NP87 494 aaPredicted RBP9.85□□□□□ -0.83
CALD1-203ENST00000393118 A0A1B0GVC2 190 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 SERTM1A2A2V5 107 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 UNC119BA6NIH7 251 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 A6NIN4 97 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 BLOC1S5-TXNDC5H3BN57 136 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 ERVH48-1M5A8F1 160 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 PROM1O43490 865 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 GPX5O75715 221 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 PYCR1P32322 319 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 CRYZQ08257 329 aaKnown RBP9.84□□□□□ -0.83
CALD1-203ENST00000393118 SNTA1Q13424 505 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 TMEM44Q2T9K0 475 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 ACOT11Q8WXI4 607 aaPredicted RBP9.84□□□□□ -0.83
CALD1-203ENST00000393118 MMABQ96EY8 250 aaPredicted RBP9.84□□□□□ -0.83
CALD1-203ENST00000393118 DGAT2Q96PD7 388 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 ERMAPQ96PL5 475 aaPredicted RBP9.84□□□□□ -0.83
CALD1-203ENST00000393118 PITHD1Q9GZP4 211 aaPredicted RBP9.84□□□□□ -0.83
CALD1-203ENST00000393118 WASH6PQ9NQA3 447 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 NAALAD2Q9Y3Q0 740 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 A0A1B0GVT2 93 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 POM121CA8CG34 1229 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 MAN2B1O00754 1011 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 GCM2O75603 506 aaPredicted RBP9.84□□□□□ -0.83
CALD1-203ENST00000393118 GLULP15104 373 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 RPS19P39019 145 aaKnown RBP9.84□□□□□ -0.83
CALD1-203ENST00000393118 AP2S1P53680 142 aaPredicted RBP9.84□□□□□ -0.83
CALD1-203ENST00000393118 LSM11P83369 360 aaKnown RBP eCLIP9.84□□□□□ -0.83
CALD1-203ENST00000393118 ERV3-1Q14264 604 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 SHHQ15465 462 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 ACBD7Q8N6N7 88 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 OR5T3Q8NGG3 340 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 TMEM255BQ8WV15 326 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 MRPL48Q96GC5 212 aaKnown RBP9.84□□□□□ -0.83
CALD1-203ENST00000393118 ZNF582Q96NG8 517 aaPredicted RBP9.84□□□□□ -0.83
CALD1-203ENST00000393118 NDC1Q9BTX1 674 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 TRIM36Q9NQ86 728 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 APOBEC3BQ9UH17 382 aaKnown RBP9.84□□□□□ -0.83
CALD1-203ENST00000393118 FBXL21Q9UKT6 434 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 PCDHGB1Q9Y5G3 927 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 H0YGG7 62 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 UBXN7O94888 489 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 RPP14O95059 124 aaKnown RBP9.84□□□□□ -0.83
CALD1-203ENST00000393118 OR6A2O95222 327 aa9.84□□□□□ -0.83
CALD1-203ENST00000393118 SEMA4FO95754 770 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms