RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 PHOX2BQ99453 314 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 ABCB10Q9NRK6 738 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 SOHLH2Q9NX45 425 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 FLRT3Q9NZU0 649 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 KLHL3Q9UH77 587 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 IGHV5-51A0A0C4DH38 117 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 BLACEA4D250 179 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 CLDN4O14493 209 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 MAOAP21397 527 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 TBXA2RP21731 343 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 HTR1FP30939 366 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 FNTBP49356 437 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 DNASE1L3Q13609 305 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 COL13A1Q5TAT6 717 aaPredicted RBP23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 NPSR1Q6W5P4 371 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 PLEKHG7Q6ZR37 379 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 LHFPL3Q86UP9 236 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 ADAMTS18Q8TE60 1221 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 TMEM203Q969S6 136 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 BPIFA2Q96DR5 249 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 MMABQ96EY8 250 aaPredicted RBP23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 SPACA7Q96KW9 195 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 BARHL1Q9BZE3 327 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 MED31Q9Y3C7 131 aa23.67■■□□□ 1.38
SMARCD3-203ENST00000392811 A0A075B6Q4 140 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 PNMA8CA0A1B0GUJ8 204 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 SAGE2PA6NJ88 616 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 SOCS6O14544 535 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 AQP9O43315 295 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 ADAM11O75078 769 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 GUSBP08236 651 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 SLC1A3P43003 542 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 SMAD2Q15796 467 aaKnown RBP23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 TMPRSS11FQ6ZWK6 438 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 CADM4Q8NFZ8 388 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 OR52L1Q8NGH7 329 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 PTCHD1Q96NR3 888 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 EVA1AQ9H8M9 152 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 ISYNA1Q9NPH2 558 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 POLE4Q9NR33 117 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 TXNL4BQ9NX01 149 aaKnown RBP23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 DNAJB12Q9NXW2 375 aaKnown RBP23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 EXOGQ9Y2C4 368 aaKnown RBP23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 TMEM184BQ9Y519 407 aaPredicted RBP23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 A0A0B4J2E0 115 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 A0A1B0GX12 115 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 FAM183AA6NL82 134 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 STK25O00506 426 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 BHLHE40O14503 412 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 CTDSP2O14595 271 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 RPL6Q02878 288 aaKnown RBP23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 TPBGQ13641 420 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 CXXC5Q7LFL8 322 aaKnown RBP23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 GRAMD2AQ8IUY3 354 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 CDK20Q8IZL9 346 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 ZNF485Q8NCK3 441 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 RCBTB1Q8NDN9 531 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 OR13C2Q8NGS9 318 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 MEPEQ9NQ76 525 aaPredicted RBP23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 SNTG1Q9NSN8 517 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 H2AFY2Q9P0M6 372 aaPredicted RBP23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 TMEM5Q9Y2B1 443 aa23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 YARS2Q9Y2Z4 477 aaKnown RBP23.66■■□□□ 1.38
SMARCD3-203ENST00000392811 A0A1B0GWA3 101 aa23.65■■□□□ 1.38
SMARCD3-203ENST00000392811 TBX1O43435 398 aa23.65■■□□□ 1.38
SMARCD3-203ENST00000392811 SDC3O75056 442 aa23.65■■□□□ 1.38
SMARCD3-203ENST00000392811 ACAA2P42765 397 aaKnown RBP23.65■■□□□ 1.38
SMARCD3-203ENST00000392811 GPR3P46089 330 aa23.65■■□□□ 1.38
SMARCD3-203ENST00000392811 GARNL3Q5VVW2 1013 aa23.65■■□□□ 1.38
SMARCD3-203ENST00000392811 CHRDL2Q6WN34 429 aa23.65■■□□□ 1.38
SMARCD3-203ENST00000392811 LYSMD2Q8IV50 215 aa23.65■■□□□ 1.38
SMARCD3-203ENST00000392811 OTULINQ96BN8 352 aa23.65■■□□□ 1.38
SMARCD3-203ENST00000392811 ARHGAP9Q9BRR9 750 aa23.65■■□□□ 1.38
SMARCD3-203ENST00000392811 SPRTNQ9H040 489 aaPredicted RBP23.65■■□□□ 1.38
SMARCD3-203ENST00000392811 MRPS17Q9Y2R5 130 aaKnown RBP23.65■■□□□ 1.38
SMARCD3-203ENST00000392811 TLCD2A6NGC4 264 aa23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 PLD2O14939 933 aa23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 PRAMEF2O60811 474 aa23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 RFPL3O75679 317 aa23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 BMP7P18075 431 aa23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 ETV6P41212 452 aa23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 PGDP52209 483 aa23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 RPS25P62851 125 aaKnown RBP23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 ZNF181Q2M3W8 571 aa23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 PLBD1Q6P4A8 553 aa23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 SIAEQ9HAT2 523 aa23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 SMURF1Q9HCE7 757 aa23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 PDE7BQ9NP56 450 aa23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 CRNNQ9UBG3 495 aaPredicted RBP23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 ERVK-19Q9WJR5 959 aa23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 SF3B6Q9Y3B4 125 aaKnown RBP23.64■■□□□ 1.38
SMARCD3-203ENST00000392811 LMO7DNF2Z398 122 aa23.64■■□□□ 1.37
SMARCD3-203ENST00000392811 LRRTM2O43300 516 aa23.64■■□□□ 1.37
SMARCD3-203ENST00000392811 CHP2O43745 196 aa23.64■■□□□ 1.37
SMARCD3-203ENST00000392811 CTBP2P56545 445 aa23.64■■□□□ 1.37
SMARCD3-203ENST00000392811 DSG2Q14126 1118 aa23.64■■□□□ 1.37
SMARCD3-203ENST00000392811 NNATQ16517 81 aa23.64■■□□□ 1.37
SMARCD3-203ENST00000392811 PLK5Q496M5 336 aa23.64■■□□□ 1.37
SMARCD3-203ENST00000392811 SLC35F1Q5T1Q4 408 aa23.64■■□□□ 1.37
SMARCD3-203ENST00000392811 NKAIN2Q5VXU1 208 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms