RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 ZNF354BQ96LW1 612 aa15.92■□□□□ 0.14
TRAF3IP1-202ENST00000391993 OR14A2Q96R54 314 aa15.92■□□□□ 0.14
TRAF3IP1-202ENST00000391993 AIF1LQ9BQI0 150 aa15.92■□□□□ 0.14
TRAF3IP1-202ENST00000391993 C20orf24Q9BUV8 137 aa15.92■□□□□ 0.14
TRAF3IP1-202ENST00000391993 EFCAB11Q9BUY7 163 aa15.92■□□□□ 0.14
TRAF3IP1-202ENST00000391993 ASH2LQ9UBL3 628 aa15.92■□□□□ 0.14
TRAF3IP1-202ENST00000391993 LY86O95711 162 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 TXNDC12O95881 172 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 IGF2P01344 180 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 S100A2P29034 98 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 DLSTP36957 453 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 S100A10P60903 97 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 SYNPRQ8TBG9 265 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 PPP1R3EQ9H7J1 279 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 ZFP64Q9NPA5 681 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 ZNF254O75437 659 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 PRKRAO75569 313 aaKnown RBP15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 DCTDP32321 178 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 CLDN2P57739 230 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 CCL14Q16627 93 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 DPPA4Q7L190 304 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 VRK2Q86Y07 508 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 TMEM99Q8N816 258 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 GPR137Q96N19 417 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 NKX3-1Q99801 234 aaPredicted RBP15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 PARP12Q9H0J9 701 aaKnown RBP15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 CCL27Q9Y4X3 112 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 OR5K3A6NET4 321 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 LCMT2O60294 686 aaKnown RBP15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 RORAP35398 523 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 MEOX2P50222 304 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 ST8SIA6P61647 398 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 TLE2Q04725 743 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 AVPI1Q5T686 147 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 ADAM5Q6NVV9 412 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 TPRG1Q6ZUI0 275 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 PRICKLE2Q7Z3G6 844 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 RD3Q7Z3Z2 195 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 LRRTM1Q86UE6 522 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 COMMD2Q86X83 199 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 DPF3Q92784 378 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 DZANK1Q9NVP4 752 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 PGAP2Q9UHJ9 254 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 UBL3O95164 117 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 GKN3PP0CG01 181 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 GZMMP51124 257 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 TPBGQ13641 420 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 C9orf152Q5JTZ5 239 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 METTL3Q86U44 580 aaKnown RBP15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 CMTM8Q8IZV2 173 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 RAB42Q8N4Z0 105 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 OR4D9Q8NGE8 314 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 DERL3Q96Q80 235 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 ZNF559Q9BR84 538 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 NTMQ9P121 344 aa15.91■□□□□ 0.14
TRAF3IP1-202ENST00000391993 LIMS3P0CW19 117 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 LIMS4P0CW20 117 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 PIPP12273 146 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 FUT1P19526 365 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 OR2B8PP59922 312 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 RAB33AQ14088 237 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 TAF1CQ15572 869 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 SHEQ5VZ18 495 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 TSSK4Q6SA08 328 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 OR1F2PQ96R84 312 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 SLC6A7Q99884 636 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 LIPT1Q9Y234 373 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 STRCQ7RTU9 1775 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 ERI3O43414 337 aaKnown RBP15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 OAZ2O95190 189 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 ZNF8P17098 575 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 MAGEB1P43366 347 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 DEFA6Q01524 100 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 PEA15Q15121 130 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 PRRT3Q5FWE3 981 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 BHLHA9Q7RTU4 235 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 FAM129CQ86XR2 697 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 MRPL48Q96GC5 212 aaKnown RBP15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 MS4A3Q96HJ5 214 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 WDR77Q9BQA1 342 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 TINAGL1Q9GZM7 467 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 ZNF780BQ9Y6R6 833 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 EP400Q96L91 3159 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 CACNB4O00305 520 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 COCHO43405 550 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 KHKP50053 298 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 HLXQ14774 488 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 TSC22D1Q15714 1073 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 GSG1Q2KHT4 349 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 PRAMEF14Q5SWL7 426 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 OAFQ86UD1 273 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 ASB11Q8WXH4 323 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 LOXHD1Q8IVV2 1947 aa15.9■□□□□ 0.14
TRAF3IP1-202ENST00000391993 NPIPA5A0A0B4J1W7 369 aa15.89■□□□□ 0.13
TRAF3IP1-202ENST00000391993 TMEM202A6NGA9 273 aa15.89■□□□□ 0.13
TRAF3IP1-202ENST00000391993 NPIPA7E9PJI5 369 aa15.89■□□□□ 0.13
TRAF3IP1-202ENST00000391993 AMY2AP04746 511 aa15.89■□□□□ 0.13
TRAF3IP1-202ENST00000391993 NPIPA8P0DM63 369 aa15.89■□□□□ 0.13
TRAF3IP1-202ENST00000391993 CCND3P30281 292 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms