RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 NR1H2P55055 460 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 PKNOX1P55347 436 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 PRR5P85299 388 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 CKAP4Q07065 602 aaKnown RBP6.88□□□□□ -1.31
TRAV6-201ENST00000390428 CAPRIN1Q14444 709 aaKnown RBP6.88□□□□□ -1.31
TRAV6-201ENST00000390428 ZNHIT3Q15649 155 aaPredicted RBP6.88□□□□□ -1.31
TRAV6-201ENST00000390428 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRAV6-201ENST00000390428 SPDYAQ5MJ70 313 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 LGSNQ5TDP6 509 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 FAM71E1Q6IPT2 247 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 APOOLQ6UXV4 268 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 STAC2Q6ZMT1 411 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 TIFABQ6ZNK6 161 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 CXXC5Q7LFL8 322 aaKnown RBP6.88□□□□□ -1.31
TRAV6-201ENST00000390428 SLC22A9Q8IVM8 553 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 OR6K3Q8NGY3 331 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 OR10D3Q8NH80 312 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 CDC26Q8NHZ8 85 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRAV6-201ENST00000390428 TMEM171Q8WVE6 324 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 ELP4Q96EB1 424 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 GMPPAQ96IJ6 420 aaPredicted RBP6.88□□□□□ -1.31
TRAV6-201ENST00000390428 KCNA7Q96RP8 456 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 FMO2Q99518 471 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 TMEM204Q9BSN7 226 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 PRRG4Q9BZD6 226 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 TBL1XR1Q9BZK7 514 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 CXorf56Q9H5V9 222 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 DDX18Q9NVP1 670 aaKnown RBP6.88□□□□□ -1.31
TRAV6-201ENST00000390428 PAQR5Q9NXK6 330 aaPredicted RBP6.88□□□□□ -1.31
TRAV6-201ENST00000390428 GRID1Q9ULK0 1009 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 CLEC4AQ9UMR7 237 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 STK38LQ9Y2H1 464 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 POLR3KQ9Y2Y1 108 aaPredicted RBP6.88□□□□□ -1.31
TRAV6-201ENST00000390428 EMC9Q9Y3B6 208 aa6.88□□□□□ -1.31
TRAV6-201ENST00000390428 A0A087WUV0 522 aaPredicted RBP6.87□□□□□ -1.31
TRAV6-201ENST00000390428 UQCRHLA0A096LP55 91 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 GXYLT2A0PJZ3 443 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 CCDC151A5D8V7 595 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 TTC36A6NLP5 189 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 ALG1L2C9J202 215 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 HS3ST1O14792 307 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 GMFGO60234 142 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 SS18L1O75177 396 aaPredicted RBP6.87□□□□□ -1.31
TRAV6-201ENST00000390428 KCNH1O95259 989 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 PLGP00747 810 aaPredicted RBP6.87□□□□□ -1.31
TRAV6-201ENST00000390428 IGKV1D-16P01601 117 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 IFI6P09912 130 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 ZNF17P17021 662 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 GCAP28676 217 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 ECHS1P30084 290 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 NTSP30990 170 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 GABRA3P34903 492 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 FOXA1P55317 472 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 ATP5J2P56134 94 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 CTBP2P56545 445 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 KRTAP1-1Q07627 177 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 LCP2Q13094 533 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 CTU2Q2VPK5 515 aaKnown RBP6.87□□□□□ -1.31
TRAV6-201ENST00000390428 GRAMD1BQ3KR37 738 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 PPP4R4Q6NUP7 873 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 LCA5Q86VQ0 697 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 WDR75Q8IWA0 830 aaKnown RBP6.87□□□□□ -1.31
TRAV6-201ENST00000390428 C17orf53Q8N3J3 647 aaPredicted RBP6.87□□□□□ -1.31
TRAV6-201ENST00000390428 ZNF611Q8N823 705 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 SPATA3Q8NHX4 192 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 FAM76AQ8TAV0 307 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 PIWIL2Q8TC59 973 aaKnown RBP6.87□□□□□ -1.31
TRAV6-201ENST00000390428 PIK3R3Q92569 461 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 SLC9A6Q92581 669 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 HOXB13Q92826 284 aaPredicted RBP6.87□□□□□ -1.31
TRAV6-201ENST00000390428 L3HYPDHQ96EM0 354 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 ADGRG7Q96K78 797 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 AMDHD1Q96NU7 426 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 NPAS1Q99742 590 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 ACTR6Q9GZN1 396 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 OR10A4Q9H209 315 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 GSTO2Q9H4Y5 243 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 C3orf14Q9HBI5 128 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 MID1IP1Q9NPA3 183 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 MYNNQ9NPC7 610 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 FANCFQ9NPI8 374 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 GLRX2Q9NS18 164 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 C19orf73Q9NVV2 129 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 MCTS1Q9ULC4 181 aaKnown RBP6.87□□□□□ -1.31
TRAV6-201ENST00000390428 VDAC3Q9Y277 283 aa6.87□□□□□ -1.31
TRAV6-201ENST00000390428 WBP11Q9Y2W2 641 aaKnown RBP6.87□□□□□ -1.31
TRAV6-201ENST00000390428 POLR3HQ9Y535 204 aaPredicted RBP6.87□□□□□ -1.31
TRAV6-201ENST00000390428 A0A087WZY1 265 aa6.86□□□□□ -1.31
TRAV6-201ENST00000390428 EXOC1LA0A1B0GW35 172 aa6.86□□□□□ -1.31
TRAV6-201ENST00000390428 C7orf72A4D263 438 aa6.86□□□□□ -1.31
TRAV6-201ENST00000390428 UBFD1O14562 309 aaKnown RBP6.86□□□□□ -1.31
TRAV6-201ENST00000390428 ADAMDEC1O15204 470 aa6.86□□□□□ -1.31
TRAV6-201ENST00000390428 CXCL13O43927 109 aa6.86□□□□□ -1.31
TRAV6-201ENST00000390428 CRLF1O75462 422 aa6.86□□□□□ -1.31
TRAV6-201ENST00000390428 SOX30O94993 753 aa6.86□□□□□ -1.31
TRAV6-201ENST00000390428 NKX2-2O95096 273 aa6.86□□□□□ -1.31
TRAV6-201ENST00000390428 SYNGR4O95473 234 aa6.86□□□□□ -1.31
TRAV6-201ENST00000390428 OXSR1O95747 527 aaPredicted RBP6.86□□□□□ -1.31
TRAV6-201ENST00000390428 PSMB1P20618 241 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms