RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ZNF69Q9UC07 566 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 CAMK2AQ9UQM7 478 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 UNC80Q8N2C7 3258 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 CACNB4O00305 520 aaPredicted RBP13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 ATG12O94817 140 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 UBXN7O94888 489 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 GBAP04062 536 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 ACP5P13686 325 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 CD96P40200 585 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 RPS26P62854 115 aaKnown RBP13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 BDH1Q02338 343 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 LGALS3BPQ08380 585 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 ZNF177Q13360 481 aaPredicted RBP13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 ESPNLQ6ZVH7 1005 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 OR4D9Q8NGE8 314 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 TEX47Q8TBZ9 253 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 SORCS1Q8WY21 1168 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 IGSF21Q96ID5 467 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 ANKRD19PQ9H560 264 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 ZFYVE1Q9HBF4 777 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 PRKAB1Q9Y478 270 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 MYOFQ9NZM1 2061 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 GFYI3L273 518 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 K7ERQ8 282 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 PGRMC2O15173 223 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 ITGA10O75578 1167 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 CDC123O75794 336 aaPredicted RBP13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 CD160O95971 181 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 GJA1P17302 382 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 CAPZA2P47755 286 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 KCNJ3P48549 501 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 MAT1AQ00266 395 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 SEMG2Q02383 582 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 ZNF763Q0D2J5 394 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 SYTL3Q4VX76 610 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 GRHL2Q6ISB3 625 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 HAGHLQ6PII5 290 aaPredicted RBP13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 TMEM17Q86X19 198 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 OR10K1Q8NGX5 313 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 WFDC5Q8TCV5 224 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 ZFPM2Q8WW38 1151 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 PNPLA2Q96AD5 504 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 ORAI1Q96D31 301 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 TM6SF2Q9BZW4 377 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 CWH43Q9H720 699 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 BARX1Q9HBU1 254 aaPredicted RBP13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 A4GALTQ9NPC4 353 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 CTPS2Q9NRF8 586 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 TAS2R5Q9NYW4 299 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 TAS2R3Q9NYW6 316 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 FCF1Q9Y324 198 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 ZNF106Q9H2Y7 1883 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 A0A1W2PRB8 838 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 CTDSPLO15194 276 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 SGCEO43556 437 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 GSTM3P21266 225 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 CTSCP53634 463 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 CDH4P55283 916 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 ELFN2Q5R3F8 820 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 C1orf53Q5VUE5 145 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 TXNDC8Q6A555 127 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 COMTD1Q86VU5 262 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 THOC6Q86W42 341 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 LDLRAD3Q86YD5 345 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 KRT78Q8N1N4 520 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 HDDC3Q8N4P3 179 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 LINC00471Q8N535 108 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 C12orf45Q8N5I9 185 aaPredicted RBP13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 OR6S1Q8NH40 331 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 VOPP1Q96AW1 172 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 ART5Q96L15 291 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 FNDC11Q9BVV2 318 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 GAREM1Q9H706 876 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 DDX31Q9H8H2 851 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 PRM3Q9NNZ6 103 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 FBXL3Q9UKT7 428 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 RCE1Q9Y256 329 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 YIPF1Q9Y548 306 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 BACE2Q9Y5Z0 518 aa13.67□□□□□ -0.22
VPS9D1-201ENST00000389386 CHD9Q3L8U1 2897 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 A0A1B0GW55 424 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 PRAMEF2O60811 474 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 SPDEFO95238 335 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 ECDO95905 644 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 TIMP1P01033 207 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 DUX4L2P0CJ85 424 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 DUX4L3P0CJ86 424 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 DUX4L4P0CJ87 422 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 DUX4L5P0CJ88 424 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 DUX4L6P0CJ89 424 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 DUX4L7P0CJ90 424 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 SYN1P17600 705 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 PVALBP20472 110 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 NSG1P42857 185 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 RPS13P62277 151 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 SMAD3P84022 425 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 ARF5P84085 180 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 TNFAIP8L2Q6P589 184 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 CNKSR3Q6P9H4 555 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms