RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 HCN3Q9P1Z3 774 aa9.71□□□□□ -0.86
POLR2J3-201ENST00000379340 CFL2Q9Y281 166 aa9.71□□□□□ -0.86
POLR2J3-201ENST00000379340 PMF1-BGLAPU3KQ54 211 aa9.71□□□□□ -0.86
POLR2J3-201ENST00000379340 LOC100506127A0A0U1RQW1 187 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 GXYLT2A0PJZ3 443 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 UNC119BA6NIH7 251 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 TAF4O00268 1085 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 PEX12O00623 359 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 SURF4O15260 269 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 RCBTB2O95199 551 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 ADRA2AP08913 450 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 GNSP15586 552 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 PSMA1P25786 263 aaKnown RBP9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 CD40LGP29965 261 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 IDUAP35475 653 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 RBM34P42696 430 aaKnown RBP9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 EMDP50402 254 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 CTBP2P56545 445 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 LSM11P83369 360 aaKnown RBP eCLIP9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 HOXC5Q00444 222 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 PSG6Q00889 435 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 ZNF141Q15928 474 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 RGS21Q2M5E4 152 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 AMZ1Q400G9 498 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 ARMC4Q5T2S8 1044 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 FIGNL1Q6PIW4 674 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 MED25Q71SY5 747 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 ZNF550Q7Z398 422 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 GID4Q8IVV7 300 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 MFSD4AQ8N468 514 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 CHPT1Q8WUD6 406 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 RNFT2Q96EX2 444 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 PEX11GQ96HA9 241 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 VSTM2LQ96N03 204 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 CHCHD6Q9BRQ6 235 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 TRIM2Q9C040 744 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 DSN1Q9H410 356 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 FN3KQ9H479 309 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 HHATLQ9HCP6 504 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 Q9N2J8 555 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 NDUFB11Q9NX14 153 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 SOHLH2Q9NX45 425 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 ETAA1Q9NY74 926 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 TAS2R16Q9NYV7 291 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 KCNE5Q9UJ90 142 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 ZNF223Q9UK11 482 aaPredicted RBP9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 STUB1Q9UNE7 303 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 NTNG1Q9Y2I2 539 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 CORINQ9Y5Q5 1042 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 PEX16Q9Y5Y5 336 aa9.7□□□□□ -0.86
POLR2J3-201ENST00000379340 CEP192Q8TEP8 1941 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 CENPVL1A0A0U1RR11 272 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 RHPN2P1A8MT19 583 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 J3QRK9 145 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 KPNA4O00629 521 aaPredicted RBP9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 CHP2O43745 196 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 PIP5K1CO60331 668 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 SULT1C4O75897 302 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 LYPD3O95274 346 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 BMP4P12644 408 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 HTR2AP28223 471 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 S100A5P33763 92 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 GPR4P46093 362 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 MTNR1AP48039 350 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 GAS1P54826 345 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 WNT4P56705 351 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 DMWDQ09019 674 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 FUT7Q11130 342 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 SRSF5Q13243 272 aaKnown RBP9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 INAQ16352 499 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 SSX1Q16384 188 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 ANKDD1AQ495B1 522 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 NXNL2Q5VZ03 156 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 DGAT2L6Q6ZPD8 337 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 TMPRSS11FQ6ZWK6 438 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 ZBTB46Q86UZ6 589 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 OR7G1Q8NGA0 311 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 OR4Q3Q8NH05 313 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 B4GALNT2Q8NHY0 566 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 C1orf216Q8TAB5 229 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 FANK1Q8TC84 345 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 MVB12AQ96EY5 273 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 MMABQ96EY8 250 aaPredicted RBP9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 COX4I2Q96KJ9 171 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 HSPA12BQ96MM6 686 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 JAM3Q9BX67 310 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 MIR1-1HGQ9H1L0 117 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 FBXO34Q9NWN3 711 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 IRAK4Q9NWZ3 460 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 H2AFY2Q9P0M6 372 aaPredicted RBP9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 PRODH2Q9UF12 536 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 GMEB2Q9UKD1 530 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 BAIAP2Q9UQB8 552 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 MED31Q9Y3C7 131 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 MMACHCQ9Y4U1 282 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 CSNK1G3Q9Y6M4 447 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 THADAQ6YHU6 1953 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 ZZEF1O43149 2961 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 SDK1Q7Z5N4 2213 aa9.69□□□□□ -0.86
POLR2J3-201ENST00000379340 TP53BP1Q12888 1972 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms