RNA–Protein interactions for RNA: ENST00000378600.7

DDB2-202, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene DDB2, Length 717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-202ENST00000378600 LAT2Q9GZY6 243 aa10.31□□□□□ -0.76
DDB2-202ENST00000378600 BCL2L10Q9HD36 194 aa10.31□□□□□ -0.76
DDB2-202ENST00000378600 EXOSC3Q9NQT5 275 aaKnown RBP10.31□□□□□ -0.76
DDB2-202ENST00000378600 SPRR3Q9UBC9 169 aa10.31□□□□□ -0.76
DDB2-202ENST00000378600 ERRFI1Q9UJM3 462 aaPredicted RBP10.31□□□□□ -0.76
DDB2-202ENST00000378600 TINAGQ9UJW2 476 aa10.31□□□□□ -0.76
DDB2-202ENST00000378600 ICAM5Q9UMF0 924 aa10.31□□□□□ -0.76
DDB2-202ENST00000378600 ZNF232Q9UNY5 417 aa10.31□□□□□ -0.76
DDB2-202ENST00000378600 IFT52Q9Y366 437 aa10.31□□□□□ -0.76
DDB2-202ENST00000378600 L3MBTL1Q9Y468 752 aa10.31□□□□□ -0.76
DDB2-202ENST00000378600 C5orf58C9J3I9 102 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 FBP2O00757 339 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 DNAJA2O60884 412 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 SEMA7AO75326 666 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 TNFRSF21O75509 655 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 DCTN3O75935 186 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 NUDT14O95848 222 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 LDLRP01130 860 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 NID1P14543 1247 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 ETS2P15036 469 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 PGCP20142 388 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 RPS4Y1P22090 263 aaKnown RBP10.3□□□□□ -0.76
DDB2-202ENST00000378600 ACVR2AP27037 513 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 SLC6A8P48029 635 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 GYS2P54840 703 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 SF3A3Q12874 501 aaKnown RBP eCLIP10.3□□□□□ -0.762e-6■■□□□ 12.3
DDB2-202ENST00000378600 LARS2Q15031 903 aaKnown RBP10.3□□□□□ -0.76
DDB2-202ENST00000378600 EMC4Q5J8M3 183 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 GCNT6Q5T4J0 391 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 RAET1LQ5VY80 246 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 XKRXQ6PP77 449 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 PIGWQ7Z7B1 504 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 SERPINA11Q86U17 422 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 MTDHQ86UE4 582 aaKnown RBP10.3□□□□□ -0.76
DDB2-202ENST00000378600 RETREG3Q86VR2 466 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 MSRB3Q8IXL7 192 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 ZNF440Q8IYI8 595 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 ANKFN1Q8N957 763 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 GATSQ8NAP1 163 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 FAM71CQ8NEG0 241 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 BHLHE22Q8NFJ8 381 aaPredicted RBP10.3□□□□□ -0.76
DDB2-202ENST00000378600 OR8J3Q8NGG0 315 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 OR5W2Q8NH69 310 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 ZPLD1Q8TCW7 415 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 WDR60Q8WVS4 1066 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 TMEM234Q8WY98 164 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 DMRTA2Q96SC8 542 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 TREX2Q9BQ50 279 aaPredicted RBP10.3□□□□□ -0.76
DDB2-202ENST00000378600 THUMPD3Q9BV44 507 aaKnown RBP10.3□□□□□ -0.76
DDB2-202ENST00000378600 SPATA5L1Q9BVQ7 753 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 CCDC106Q9BWC9 280 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 FAM107BQ9H098 131 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 PNPLA3Q9NST1 481 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 KCNE5Q9UJ90 142 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 CARD8Q9Y2G2 431 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 AP3M1Q9Y2T2 418 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 ARL2BPQ9Y2Y0 163 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 SLC6A5Q9Y345 797 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 GPC6Q9Y625 555 aaPredicted RBP10.3□□□□□ -0.76
DDB2-202ENST00000378600 AP4B1Q9Y6B7 739 aa10.3□□□□□ -0.76
DDB2-202ENST00000378600 NCOA6Q14686 2063 aaPredicted RBP10.3□□□□□ -0.76
DDB2-202ENST00000378600 NPIPA5A0A0B4J1W7 369 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 LOC100653049A0A140TA62 436 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 B4DXG7 233 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 NPIPA7E9PJI5 369 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 MRASO14807 208 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 KRT34O76011 436 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 ZIC2O95409 532 aaPredicted RBP10.29□□□□□ -0.76
DDB2-202ENST00000378600 C1QCP02747 245 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 CHRM4P08173 479 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 NPIPA8P0DM63 369 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 ARAFP10398 606 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 UQCRBP14927 111 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 ZNF708P17019 499 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 SLC6A2P23975 617 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 ELK4P28324 431 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 PRDX6P30041 224 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 PGM1P36871 562 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 SRSF1Q07955 248 aaKnown RBP eCLIP10.29□□□□□ -0.763e-9■■■■■ 37.2
DDB2-202ENST00000378600 SKP2Q13309 424 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 TMEM44Q2T9K0 475 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 PLPPR5Q32ZL2 321 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 LIN52Q52LA3 116 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 SLC25A53Q5H9E4 307 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 C1orf185Q5T7R7 199 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 REP15Q6BDI9 236 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 REEP3Q6NUK4 255 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 ZNF585AQ6P3V2 769 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 B3GNT6Q6ZMB0 384 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 ARPINQ7Z6K5 226 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 SNX32Q86XE0 403 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 KRT73Q86Y46 540 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 GRAMD2AQ8IUY3 354 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 LACC1Q8IV20 430 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 ULK2Q8IYT8 1036 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 GTPBP8Q8N3Z3 284 aaPredicted RBP10.29□□□□□ -0.76
DDB2-202ENST00000378600 MEIOBQ8N635 442 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 ANKS4BQ8N8V4 417 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 OR52P1PQ8NH57 321 aa10.29□□□□□ -0.76
DDB2-202ENST00000378600 ST8SIA1Q92185 356 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms